Modern research computing cyberinfrastructure, such as ACCESS-CI and NAIRR Pilot, offers GPU resources across geographically distributed clusters to accommodate the increasing needs of scientific deep learning (DL) workloads. Even for high-performance computing (HPC) experts, configuring environments and managing DL workloads across supercomputers remain significant barriers. To address these obstacles, we present Diamond, an open-source platform to simplify and streamline the DL lifecycle on HPC. Diamond provides an intuitive graphical interface that abstracts system-level complexity, enabling users to develop, debug, and deploy DL models with minimal overhead. We identify several challenges in building such a platform, including portability, security, and usability, and propose effective architectural solutions to each. Notably, Diamond enables users to share and reuse DL workload environments across systems and collaborators, reducing redundant setup efforts. Experimental results demonstrate that Diamond reduces the time to first successful deployment by an average of 68%, compared to manual configuration with command lines. The Diamond service is available at https://diamondhpc.ai.

Scaling laws are powerful tools to predict the performance of large language models. However, current scaling laws fall short of accounting for inference costs. In this work, we first show that model architecture affects inference latency, where models of the same size can have up to $3.5\times$ difference in latency. To tackle this challenge, we modify the Chinchilla scaling laws to co-optimize the model parameter count, the number of training tokens, and the model architecture. Due to the reason that models of similar training loss exhibit gaps in downstream evaluation, we also propose a novel method to train inference-efficient models based on the revised scaling laws. We perform extensive empirical studies to fit and evaluate our inference-aware scaling laws. We vary model parameters from 80M to 1B, training tokens from 1.6B to 30B, and model shapes, training 63 models. Guided by our inference-efficient scaling law and model selection method, we release the Morph-1B model, which improves inference latency by $1.8\times$ while maintaining accuracy on downstream tasks compared to open-source models, pushing the Pareto frontier of accuracy-latency tradeoff. Notably, our experiments reveal that wider and shallower models can yield efficiency gains while preserving accuracy.

Minghao Yan, Saurabh Agarwal, Shivaram Venkataraman. Proceedings of the 2025 Conference of the Nations of the Americas Chapter of the Association for Computational Linguistics: Human Language Technologies (Volume 1: Long Papers). 2025.

Since its inception, blockchain technology has been characterized by its core attributes of immutability, traceability, and decentralization, which are fundamental to ensuring data security. In the contemporary digital landscape, medical data has emerged as a critical asset, and the integration of blockchain into healthcare has facilitated a range of innovative solutions for secure and efficient data sharing. Beyond its role in data security, blockchain’s smart contracts have attracted significant research interest due to their potential to automate processes and enhance efficiency in medical research and healthcare operations. In this context, this survey provides a systematic and in-depth exploration of blockchain applications in healthcare, with a focus on: (1) analyzing the technical foundations of blockchain and its suitability for healthcare applications; (2) synthesizing the eight key domains where blockchain has demonstrated impact in the healthcare sector; and (3) critically examining the challenges that hinder blockchain adoption in healthcare while identifying future research directions. By presenting a comprehensive review of blockchains transformative potential in healthcare, this survey offers valuable insights for researchers and practitioners engaged in this evolving interdisciplinary field.

DNA sequencing, especially of microbial genomes and metagenomes, has been at the core of recent research advances in large-scale comparative genomics. The data deluge has resulted in exponential growth in genomic datasets over the past years and has shown no sign of slowing down. Several recent attempts have been made to tame the computational burden of sequence search on these terabyte and petabyte-scale datasets, including raw reads and assembled genomes. However, no known implementation provides both fast query and construction time, keeps the low false-positive requirement, and offers cheap storage of the data structure. We propose a data structure for search called RAMBO (Repeated And Merged BloOm Filter) which is significantly faster in query time than state-of-the-art genome indexing methods- COBS (Compact bit-sliced signature index), Sequence Bloom Trees, HowDeSBT, and SSBT. Furthermore, it supports insertion and query process parallelism, cheap updates for streaming inputs, has a zero false-negative rate, a low false-positive rate, and a small index size. RAMBO converts the search problem into set membership testing among K documents. Interestingly, it is a count-min sketch type arrangement of a membership testing utility (Bloom Filter in our case). The simplicity of the algorithm and embarrassingly parallel architecture allows us to stream and index a 170TB whole-genome sequence dataset in a mere 9 hours on a cluster of 100 nodes while competing methods require weeks.