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Seonghyeon Lee

dblp:251/9511 · DBLP profile ↗
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9ranked-venue papers
3as first author
8since 2021 · last 2026
—ORCID · conflict

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 7 · 3 first-author · 6 since 2021Databases, data management, data science and information retrieval · 3 · 1 first-author · 2 since 2021Graphics, computer vision, multimedia, augmented reality and games · 3 · 3 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
5 papers
Graph learning · 46% Representation and self-supervised learning · 21% Time series and sequential data · 8%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Databases, data mining, and information retrieval
1 paper
Information retrieval · 100%

Topics — the 14 heaviest of 15, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Graph learning
graph neural network
1.222023
Learning Topology-Specific Experts for Molecular Property Prediction · AAAI 2023
Learnable Structural Semantic Readout for Graph Classification · ICDM 2021
Machine learning › Graph learning › molecular representation learning › molecular graph learning
molecular property prediction
0.712023
Learning Topology-Specific Experts for Molecular Property Prediction · AAAI 2023
Bioinformatics and computational biology › sequence analysis
genomic sequence analysis
0.712023
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing · Bioinform. 2023
Bioinformatics and computational biology › sequence analysis
nanopore sequencing
0.712023
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing · Bioinform. 2023
Bioinformatics and computational biology › sequence analysis
sequencing data analysis
0.712023
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing · Bioinform. 2023
Machine learning › Representation and self-supervised learning
contrastive learning
0.612022
Toward Interpretable Semantic Textual Similarity via Optimal Transport-based Contrastive Sentence Learning · ACL (1) 2022
Machine learning › Representation and self-supervised learning › text embedding
sentence embedding
0.612022
Toward Interpretable Semantic Textual Similarity via Optimal Transport-based Contrastive Sentence Learning · ACL (1) 2022
Information retrieval › similarity measure
semantic textual similarity
0.612022
Toward Interpretable Semantic Textual Similarity via Optimal Transport-based Contrastive Sentence Learning · ACL (1) 2022
Machine learning › Deep learning architectures and training
convolutional neural network
0.512021
Learnable Dynamic Temporal Pooling for Time Series Classification · AAAI 2021
Machine learning › Graph learning
graph classification
0.512021
Learnable Structural Semantic Readout for Graph Classification · ICDM 2021
Machine learning › Graph learning › graph neural network › graph pooling
graph readout
0.512021
Learnable Structural Semantic Readout for Graph Classification · ICDM 2021
Computer vision › Video understanding and tracking
temporal pooling
0.512021
Learnable Dynamic Temporal Pooling for Time Series Classification · AAAI 2021
Natural language and speech › Information extraction and text analysis
text classification
0.512021
OoMMix: Out-of-manifold Regularization in Contextual Embedding Space for Text Classification · ACL/IJCNLP (1) 2021
Machine learning › Time series and sequential data › time series analysis
time series classification
0.512021
Learnable Dynamic Temporal Pooling for Time Series Classification · AAAI 2021

Methods — techniques the papers use, named apart from their topics

optimal transport · 1.1contrastive learning · 1.1self-supervision · 0.7nextflow pipeline · 0.7clustering-based gating · 0.7out-of-manifold regularization · 0.5graph neural network · 0.5dynamic time warping · 0.5convolutional neural network · 0.5contextual embeddings · 0.5
YearPublicationVenuePosition
2026 On the Effectiveness of Integration Methods for Multimodal Dialogue Response Retrieval
abstract
Multimodal chatbots have become one of the major topics for dialogue systems in both research community and industry. Recently, researchers have shed light on the multimodality of responses as well as dialogue contexts. This work explores how a dialogue system can output responses in various modalities such as text and image. To this end, we first formulate a multimodal dialogue response retrieval task for retrieval-based systems as the combination of three subtasks. We then propose three integration methods based on a two-step approach and an end-to-end approach, and compare the merits and demerits of each method. Experimental results on two datasets demonstrate that the end-to-end approach achieves comparable performance without an intermediate step in the two-step approach. In addition, a parameter sharing strategy not only reduces the number of parameters but also boosts performance by transferring knowledge across the subtasks and the modalities.
Seongbo Jang, Seonghyeon Lee, Dongha Lee 0003, Hwanjo Yu
ICMR2
2024 KoDialogBench: Evaluating Conversational Understanding of Language Models with Korean Dialogue Benchmark
abstract
As language models are often deployed as chatbot assistants, it becomes a virtue for models to engage in conversations in a user’s first language. While these models are trained on a wide range of languages, a comprehensive evaluation of their proficiency in low-resource languages such as Korean has been lacking. In this work, we introduce KoDialogBench, a benchmark designed to assess language models’ conversational capabilities in Korean. To this end, we collect native Korean dialogues on daily topics from public sources, or translate dialogues from other languages. We then structure these conversations into diverse test datasets, spanning from dialogue comprehension to response selection tasks. Leveraging the proposed benchmark, we conduct extensive evaluations and analyses of various language models to measure a foundational understanding of Korean dialogues. Experimental results indicate that there exists significant room for improvement in models’ conversation skills. Furthermore, our in-depth comparisons across different language models highlight the effectiveness of recent training techniques in enhancing conversational proficiency. We anticipate that KoDialogBench will promote the progress towards conversation-aware Korean language models.
Seongbo Jang, Seonghyeon Lee, Hwanjo Yu
LREC/COLING2
2023 Learning Topology-Specific Experts for Molecular Property Prediction
abstract
Recently, graph neural networks (GNNs) have been successfully applied to predicting molecular properties, which is one of the most classical cheminformatics tasks with various applications. Despite their effectiveness, we empirically observe that training a single GNN model for diverse molecules with distinct structural patterns limits its prediction performance. In this paper, motivated by this observation, we propose TopExpert to leverage topology-specific prediction models (referred to as experts), each of which is responsible for each molecular group sharing similar topological semantics. That is, each expert learns topology-specific discriminative features while being trained with its corresponding topological group. To tackle the key challenge of grouping molecules by their topological patterns, we introduce a clustering-based gating module that assigns an input molecule into one of the clusters and further optimizes the gating module with two different types of self-supervision: topological semantics induced by GNNs and molecular scaffolds, respectively. Extensive experiments demonstrate that TopExpert has boosted the performance for molecular property prediction and also achieved better generalization for new molecules with unseen scaffolds than baselines. The code is available at https://github.com/kimsu55/ToxExpert.
Su Yeon Kim, Dongha Lee 0003, Seongku Kang, Seonghyeon Lee, Hwanjo Yu
AAAI4
2023 VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing
abstract
Detection and analysis of viral genomes with Nanopore sequencing has shown great promise in the surveillance of pathogen outbreaks. However, the number of virus detection pipelines supporting Nanopore sequencing is very limited. Here, we present VirPipe, a new pipeline for the detection of viral genomes from Nanopore or Illumina sequencing input featuring streamlined installation and customization. AVAILABILITY AND IMPLEMENTATION: VirPipe source code and documentation are freely available for download at https://github.com/KijinKims/VirPipe, implemented in Python and Nextflow.
Kijin Kim, Kyungmin Park, Seonghyeon Lee, Seung-Hwan Baek, Tae-Hun Lim, Balachandran Manavalan, Jin-Won Song, Won-Keun Kim
Bioinform.3
2022 Toward Interpretable Semantic Textual Similarity via Optimal Transport-based Contrastive Sentence Learning
abstract
Recently, finetuning a pretrained language model to capture the similarity between sentence embeddings has shown the state-of-theart performance on the semantic textual similarity (STS) task.However, the absence of an interpretation method for the sentence similarity makes it difficult to explain the model output.In this work, we explicitly describe the sentence distance as the weighted sum of contextualized token distances on the basis of a transportation problem, and then present the optimal transport-based distance measure, named RCMD; it identifies and leverages semantically-aligned token pairs.In the end, we propose CLRCMD, a contrastive learning framework that optimizes RCMD of sentence pairs, which enhances the quality of sentence similarity and their interpretation.Extensive experiments demonstrate that our learning framework outperforms other baselines on both STS and interpretable-STS benchmarks, indicating that it computes effective sentence similarity and also provides interpretation consistent with human judgement.The code and checkpoint are publicly available at https: //github.com/sh0416/clrcmd.
Seonghyeon Lee, Dongha Lee 0003, Seongbo Jang, Hwanjo Yu
ACL (1)1
2021 Learnable Dynamic Temporal Pooling for Time Series Classification
abstract
With the increase of available time series data, predicting their class labels has been one of the most important challenges in a wide range of disciplines. Recent studies on time series classification show that convolutional neural networks (CNN) achieved the state-of-the-art performance as a single classifier. In this work, pointing out that the global pooling layer that is usually adopted by existing CNN classifiers discards the temporal information of high-level features, we present a dynamic temporal pooling (DTP) technique that reduces the temporal size of hidden representations by aggregating the features at the segment-level. For the partition of a whole series into multiple segments, we utilize dynamic time warping (DTW) to align each time point in a temporal order with the prototypical features of the segments, which can be optimized simultaneously with the network parameters of CNN classifiers. The DTP layer combined with a fully-connected layer helps to extract further discriminative features considering their temporal position within an input time series. Extensive experiments on both univariate and multivariate time series datasets show that our proposed pooling significantly improves the classification performance.
Dongha Lee 0003, Seonghyeon Lee, Hwanjo Yu
AAAI2
2021 OoMMix: Out-of-manifold Regularization in Contextual Embedding Space for Text Classification
abstract
Seonghyeon Lee, Dongha Lee, Hwanjo Yu. Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing (Volume 1: Long Papers). 2021.
Seonghyeon Lee, Dongha Lee 0003, Hwanjo Yu
ACL/IJCNLP (1)1
2021 Learnable Structural Semantic Readout for Graph Classification
abstract
With the great success of deep learning in various domains, graph neural networks (GNNs) also become a dominant approach to graph classification. By the help of a global readout operation that simply aggregates all node (or node-cluster) representations, existing GNN classifiers obtain a graph-level representation of an input graph and predict its class label using the representation. However, such global aggregation does not consider the structural information of each node, which results in information loss on the global structure. In this work, we propose structural semantic readout (SSRead) to summarize the node representations at the position-level, which allows to model the position-specific weight parameters for classification as well as to effectively capture the graph semantic relevant to the global structure. Given an input graph, SSRead aims to identify structurally-meaningful positions by using the semantic alignment between its nodes and structural prototypes, which encode the prototypical features of each position. The structural prototypes are optimized to minimize the alignment cost for all training graphs, while the other GNN parameters are trained to predict the class labels. Our experimental results demonstrate that SSRead significantly improves the classification performance and interpretability of GNN classifiers while being compatible with a variety of aggregation functions, GNN architectures, and learning frameworks.
Dongha Lee 0003, Su Kim, Seonghyeon Lee, Chanyoung Park 0001, Hwanjo Yu
ICDM3
2019 BHIN2vec: Balancing the Type of Relation in Heterogeneous Information Network
abstract
The goal of network embedding is to transform nodes in a network to a low-dimensional embedding vectors. Recently, heterogeneous network has shown to be effective in representing diverse information in data. However, heterogeneous network embedding suffers from the imbalance issue, i.e. the size of relation types (or the number of edges in the network regarding the type) is imbalanced. In this paper, we devise a new heterogeneous network embedding method, called BHIN2vec, which considers the balance among all relation types in a network. We view the heterogeneous network embedding as simultaneously solving multiple tasks in which each task corresponds to each relation type in a network. After splitting the skip-gram loss into multiple losses corresponding to different tasks, we propose a novel random-walk strategy to focus on the tasks with high loss values by considering the relative training ratio. Unlike previous random walk strategies, our proposed random-walk strategy generates training samples according to the relative training ratio among different tasks, which results in a balanced training for the node embedding. Our extensive experiments on node classification and recommendation demonstrate the superiority of BHIN2vec compared to the state-of-the-art methods. Also, based on the relative training ratio, we analyze how much each relation type is represented in the embedding space.
Seonghyeon Lee, Chanyoung Park 0001, Hwanjo Yu
CIKM1