We present the Brain Treebank, a large-scale dataset of electrophysiological neural responses, recorded from intracranial probes while 10 subjects watched one or more Hollywood movies. Subjects watched on average 2.6 Hollywood movies, for an average viewing time of 4.3 hours, and a total of 43 hours. The audio track for each movie was transcribed with manual corrections. Word onsets were manually annotated on spectrograms of the audio track for each movie. Each transcript was automatically parsed and manually corrected into the universal dependencies (UD) formalism, assigning a part of speech to every word and a dependency parse to every sentence. In total, subjects heard over 38,000 sentences (223,000 words), while they had on average 168 electrodes implanted. This is the largest dataset of intracranial recordings featuring grounded naturalistic language, one of the largest English UD treebanks in general, and one of only a few UD treebanks aligned to multimodal features. We hope that this dataset serves as a bridge between linguistic concepts, perception, and their neural representations. To that end, we present an analysis of which electrodes are sensitive to language features while also mapping out a rough time course of language processing across these electrodes. The Brain Treebank is available at https://BrainTreebank.dev/

Robustness to natural distribution shifts has seen remarkable progress thanks to recent pre-training strategies combined with better fine-tuning methods. However, such fine-tuning assumes access to large amounts of labelled data, and the extent to which the observations hold when the amount of training data is not as high remains unknown. We address this gap by performing the first in-depth study of robustness to various natural distribution shifts in different low-shot regimes: spanning datasets, architectures, pre-trained initializations, and state-of-the-art robustness interventions. Most importantly, we find that there is no single model of choice that is often more robust than others, and existing interventions can fail to improve robustness on some datasets even if they do so in the full-shot regime. We hope that our work will motivate the community to focus on this problem of practical importance. Our code and low-shot subsets are publicly available at this url.

The plight of navigating high-dimensional transcription datasets remains a persistent problem. This problem is further amplified for complex disorders, such as cancer as these disorders are often multigenic traits with multiple subsets of genes collectively affecting the type, stage, and severity of the trait. We are often faced with a trade off between reducing the dimensionality of our datasets and maintaining the integrity of our data. To accomplish both tasks simultaneously for very high dimensional transcriptome for complex multigenic traits, we propose a new supervised technique, Class Separation Transformation (CST). CST accomplishes both tasks simultaneously by significantly reducing the dimensionality of the input space into a one-dimensional transformed space that provides optimal separation between the differing classes. Furthermore, CST offers an means of explainable ML, as it computes the relative importance of each feature for its contribution to class distinction, which can thus lead to deeper insights and discovery. We compare our method with existing state-of-the-art methods using both real and synthetic datasets, demonstrating that CST is the more accurate, robust, scalable, and computationally advantageous technique relative to existing methods. Code used in this paper is available on https://github.com/richiebailey74/CST.

Visual domain adaptation (DA) seeks to transfer trained models to unseen, unlabeled domains across distribution shift, but approaches typically focus on adapting convolutional neural network architectures initialized with supervised ImageNet representations. In this work, we shift focus to adapting modern architectures for object recognition -- the increasingly popular Vision Transformer (ViT) -- initialized with modern pretraining based on self-supervised learning (SSL). Inspired by the design of recent SSL approaches based on learning from partial image inputs generated via masking or cropping -- either by learning to predict the missing pixels, or learning representational invariances to such augmentations -- we propose PACMAC, a two-stage adaptation algorithm for self-supervised ViTs. PACMAC first performs in-domain SSL on pooled source and target data to learn task-discriminative features, and then probes the model's predictive consistency across a set of partial target inputs generated via a novel attention-conditioned masking strategy, to identify reliable candidates for self-training. Our simple approach leads to consistent performance gains over competing methods that use ViTs and self-supervised initializations on standard object recognition benchmarks. Our code is available at https://github.com/virajprabhu/PACMAC.

Artistic style transfer aims to transfer the style characteristics of one image onto another image while retaining its content. Existing approaches commonly leverage various normalization techniques, although these face limitations in adequately transferring diverse textures to different spatial locations. Self-Attention based approaches have tackled this issue with partial success but suffer from unwanted artifacts. Motivated by these observations, this paper aims to combine the best of both worlds: self-attention and normalization. That yields a new plug-and-play module that we name Self-Attentive Factorized Instance Normalization (SAFIN). SAFIN is essentially a spatially-adaptive normalization module whose parameters are inferred through attention on the content and style image. We demonstrate that plugging SAFIN into the base network of another state-of-the-art method results in enhanced stylization. We also develop a novel base network composed of Wavelet Transform for multi-scale style transfer, which when combined with SAFIN, produces visually appealing results with lesser unwanted textures.