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Lisa Gaedke-Merzhäuser

dblp:263/2300 · DBLP profile ↗
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3ranked-venue papers
1as first author
3since 2021 · last 2025
0000-0002-7586-2727ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Systems, architecture and hardware · 2 · 1 first-author · 2 since 2021Theory of computation · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Computer architecture, parallel and distributed computing, and storage systems
1 paper
High-performance computing · 77% GPUs and heterogeneous computing · 23%
Artificial intelligence
1 paper
Probabilistic and Bayesian machine learning · 100%

Topics — the 2 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Probabilistic and Bayesian machine learning › stochastic processes
gaussian process
0.912025
Accelerated Spatio-Temporal Bayesian Modeling for Multivariate Gaussian Processes · SC 2025
High-performance computing › numerical linear algebra
parallel linear algebra
0.912025
Accelerated Spatio-Temporal Bayesian Modeling for Multivariate Gaussian Processes · SC 2025

Methods — techniques the papers use, named apart from their topics

sparse inverse covariance matrix · 1.7integrated nested laplace approximation · 1.7block-dense GPU computation · 1.7
YearPublicationVenuePosition
2025 Parallel Selected Inversion of Block-Tridiagonal with Arrowhead Matrices
abstract
The inversion of structured sparse matrices is a fundamental yet computationally and memory-intensive task in many scientific applications, such as Bayesian statistical modeling and material science. In certain cases, only particular entries of the full inverse are required. This has motivated the development of so-called selected inversion algorithms (SIA), capable of computing only specific elements of the full inverse. Currently, most SIA implementations are restricted to shared-/distributed-memory CPU architectures or to single GPUs. Here, we introduce novel numerical methods to perform the parallel selected inversion and Cholesky decomposition of positive-definite, block-tridiagonal with arrowhead matrices. A distributed memory, GPU-accelerated implementation of our approach is presented and integrated into the structured solver library Serinv. We demonstrate its performance on synthetic and real datasets from statistical air temperature prediction models and achieve CPU (GPU) speedups of up to$2.6 \times(71.4 \times)$over the SIA of the PARDISO library and up to$14 \times(380.9 \times)$over the MUMPS library, when scaling to 16 processes.
Vincent Maillou, Lisa Gaedke-Merzhäuser, Alexandros Nikolaos Ziogas, Olaf Schenk, Mathieu Luisier
CLUSTER2
2025 Accelerated Spatio-Temporal Bayesian Modeling for Multivariate Gaussian Processes
abstract
Multivariate Gaussian processes (GPs) offer a powerful probabilistic framework to represent complex interdependent phenomena. They pose, however, significant computational challenges in high-dimensional settings, which frequently arise in spatio-temporal applications. We present DALIA, a highly scalable framework for performing Bayesian inference tasks on spatio-temporal multivariate GPs, based on the methodology of integrated nested Laplace approximations. Our approach relies on a sparse inverse covariance matrix formulation of the GP, puts forward a GPU-accelerated block-dense approach, and introduces a hierarchical, triple-layer, distributed-memory parallel scheme. We showcase weak-scaling performance surpassing the state of the art by two orders of magnitude on a model whose parameter space is 8 × larger and measure strong-scaling speedups of three orders of magnitude when running on 496 GH200 superchips on the Alps supercomputer. Applying DALIA to an air pollution study over northern Italy spanning 48 days, we showcase refined spatial resolutions over the aggregated pollutant measurements.
Lisa Gaedke-Merzhäuser, Vincent Maillou, Fernando Rodriguez Avellaneda, Olaf Schenk, Paula Moraga, Mathieu Luisier, Alexandros Nikolaos Ziogas, Håvard Rue
SC1
2024 Algorithm 1042: Sparse Precision Matrix Estimation with SQUIC
abstract
We present SQUIC , a fast and scalable package for sparse precision matrix estimation. The algorithm employs a second-order method to solve the \(\ell_{1}\) -regularized maximum likelihood problem, utilizing highly optimized linear algebra subroutines. In comparative tests using synthetic datasets, we demonstrate that SQUIC not only scales to datasets of up to a million random variables but also consistently delivers runtimes that are significantly faster than other well-established sparse precision matrix estimation packages. Furthermore, we showcase the application of the introduced package in classifying microarray gene expressions. We demonstrate that by utilizing a matrix form of the tuning parameter (also known as the regularization parameter), SQUIC can effectively incorporate prior information into the estimation procedure, resulting in improved application results with minimal computational overhead.
Aryan Eftekhari, Lisa Gaedke-Merzhäuser, Dimosthenis Pasadakis, Matthias Bollhöfer, Simon Scheidegger, Olaf Schenk
ACM Trans. Math. Softw.2