Zero-shot single-cell cell-type annotation aims to determine a cell's type from a given set of expressed genes without any training. Existing knowledge-graph-based RAG approaches retrieve evidence by expanding from source entities and relying on iterative LLM reasoning. However, in this setting each query contains tens to hundreds of genes, where no single gene is decisive and the label emerges only from their collective co-occurrence. Such hyper-entity queries fundamentally challenge local, entity-wise exploration strategies, which reason from individual genes, leading to poor scalability and substantial LLM cost. We propose GATHER (Graph-Aware Traversal with Hyper-Entity Retrieval), a convergence-centric retriever tailored to hyper-entity queries. It performs global multi-source graph traversal and identifies topological convergence points, nodes jointly reachable from many input genes. These convergence nodes act as high-information hyper-entities that capture entity synergy. By incorporating node- and path-importance scoring, GATHER selects informative evidence entirely without LLM involvement during retrieval. Instantiated on a self-constructed cell-centric biological knowledge graph (VCKG), GATHER outperforms strong KG-RAG baselines (ToG, ToG-2, RoG, PoG) on two datasets (Immune and Lung), achieving the highest exact-match accuracy (27.45% and 59.64%) with only a single LLM call per sample, compared to 2 to 61 calls for KG-RAG baselines. Our results demonstrate that convergence nodes compress multi-entity signals into compact, high-information evidence that conveys more per item than multi-hop paths, providing an efficient global alternative to local entity-wise reasoning.

Various Web API Recommendation (AR) techniques have assisted developers in efficiently identifying suitable APIs for mashup creation. With the emergence of large language models (LLMs), there has been increasing interest in leveraging LLMs for recommender systems. Although several approaches have attempted to utilize LLMs by framing recommendations as prompts, this approach is not ideally suited for AR due to fundamental differences in the training processes of LLMs and AR models. Consequently, it's crucial to conduct further research to identify effective applications of LLMs in AR. To this end, we propose a novelLLM-based generative solution forAPIRecommendation (LLMAR) that combines instruction learning of multitask and multistage Low-Rank Adaptation fine-tuning based on LLaMA models. Experimental results on the ProgrammableWeb dataset show that LLMAR significantly outperforms representative methods in regular and data-limited scenarios.

Graph neural network (GNN) is a robust model for processing non-Euclidean data, such as graphs, by extracting structural information and learning high-level representations. GNN has achieved state-of-the-art recommendation performance on collaborative filtering (CF) for accuracy. Nevertheless, the diversity of the recommendations has not received good attention. Existing work using GNN for recommendation suffers from the accuracy-diversity dilemma, where slightly increases diversity while accuracy drops significantly. Furthermore, GNN-based recommendation models lack the flexibility to adapt to different scenarios' demands concerning the accuracy-diversity ratio of their recommendation lists. In this work, we endeavor to address the above problems from the perspective of aggregate diversity, which modifies the propagation rule and develops a new sampling strategy. We propose graph spreading network (GSN), a novel model that leverages only neighborhood aggregation for CF. Specifically, GSN learns user and item embeddings by propagating them over the graph structure, utilizing both diversity-oriented and accuracy-oriented aggregations. The final representations are obtained by taking the weighted sum of the embeddings learned at all layers. We also present a new sampling strategy that selects potentially accurate and diverse items as negative samples to assist model training. GSN effectively addresses the accuracy-diversity dilemma and achieves improved diversity while maintaining accuracy with the help of a selective sampler. Moreover, a hyper-parameter in GSN allows for adjustment of the accuracy-diversity ratio of recommendation lists to satisfy the diverse demands. Compared to the state-of-the-art model, GSN improved R @20 by 1.62%, N @20 by 0.67%, G @20 by 3.59%, and E @20 by 4.15% on average over three real-world datasets, verifying the effectiveness of our proposed model in diversifying overall collaborative recommendations.

With the booming of deep learning, massive attention has been paid to developing neural models for multilabel text categorization (MLTC). Most of the works concentrate on disclosing word-label relationship, while less attention is taken in exploiting global clues, particularly with the relationship of document-label. To address this limitation, we propose an effective collaborative representation learning (CRL) model in this article. CRL consists of a factorization component for generating shallow representations of documents and a neural component for deep text-encoding and classification. We have developed strategies for jointly training those two components, including an alternating-least-squares-based approach for factorizing the pointwise mutual information (PMI) matrix of label-document and multitask learning (MTL) strategy for the neural component. According to the experimental results on six data sets, CRL can explicitly take advantage of the relationship of document-label and achieve competitive classification performance in comparison with some state-of-the-art deep methods.