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Maha Shady

dblp:268/6743 · DBLP profile ↗
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1ranked-venue papers
0as first author
1since 2021 · last 2021
—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 1 · 1 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Medical and health informatics · 75% Bioinformatics and computational biology · 25%

Topics — the 4 heaviest of 5, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Medical and health informatics
computational pathology
0.512021
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images · ICCV 2021
Medical and health informatics › biomedical data science
multimodal health data analysis
0.512021
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images · ICCV 2021
Bioinformatics and computational biology › survival analysis
survival prediction
0.512021
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images · ICCV 2021
Medical and health informatics › computational pathology › histopathology image analysis
whole slide image analysis
0.512021
Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images · ICCV 2021

Methods — techniques the papers use, named apart from their topics

multiple instance learning · 0.5co-attention transformer · 0.5
YearPublicationVenuePosition
2021 Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images
abstract
Survival outcome prediction is a challenging weakly-supervised and ordinal regression task in computational pathology that involves modeling complex interactions within the tumor microenvironment in gigapixel whole slide images (WSIs). Despite recent progress in formulating WSIs as bags for multiple instance learning (MIL), representation learning of entire WSIs remains an open and challenging problem, especially in overcoming: 1) the computational complexity of feature aggregation in large bags, and 2) the data heterogeneity gap in incorporating biological priors such as genomic measurements. In this work, we present a Multimodal Co-Attention Transformer (MCAT) framework that learns an interpretable, dense co-attention mapping between WSIs and genomic features formulated in an embedding space. Inspired by approaches in Visual Question Answering (VQA) that can attribute how word embed-dings attend to salient objects in an image when answering a question, MCAT learns how histology patches attend to genes when predicting patient survival. In addition to visualizing multimodal interactions, our co-attention trans-formation also reduces the space complexity of WSI bags, which enables the adaptation of Transformer layers as a general encoder backbone in MIL. We apply our proposed method on five different cancer datasets (4,730 WSIs, 67 million patches). Our experimental results demonstrate that the proposed method consistently achieves superior performance compared to the state-of-the-art methods.
Richard J. Chen, Ming Y. Lu, Wei-Hung Weng, Tiffany Y. Chen, Drew F. K. Williamson, Trevor Manz, Maha Shady, Faisal Mahmood 0001
ICCV7