Daisy Zhe Wang

dblp:27/2143 · DBLP profile ↗
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44ranked-venue papers
7as first author
15since 2021 · last 2025
0009-0003-8234-5482ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Databases, data management, data science and information retrieval · 27 · 7 first-author · 6 since 2021Artificial intelligence and machine learning · 14 · 8 since 2021Graphics, computer vision, multimedia, augmented reality and games · 5 · 2 since 2021Applied, interdisciplinary, general and emerging computing · 3 · 2 since 2021Human-computer interaction and ubiquitous computing · 1
YearPublicationVenuePosition
2025 TTQA-RS- A break-down prompting approach for Multi-hop Table-Text Question Answering with Reasoning and Summarization
abstract
Question answering (QA) over tables and text has gained much popularity over the years. Multi-hop table-text QA requires multiple hops between the table and text, making it a challenging QA task. Although several works have attempted to solve the table-text QA task, most involve training the models and requiring labeled data. In this paper, we have proposed a Retrieval Augmented Generation (RAG) based model - "TTQA-RS: A break-down prompting approach for Multi-hop Table-Text Question Answering with Reasoning and Summarization". Our model uses an enhanced retriever for table-text information retrieval and uses augmented knowledge, including table-text summary with decomposed sub-questions with answers for a reasoning-based table-text QA. Using open-source language models, our model outperformed all existing prompting methods for table-text QA tasks on existing table-text QA datasets, such as HybridQA and OTT-QA’s development set. Our experiments demonstrate the potential of prompt-based approaches using open-source LLMs. Additionally, by using LLaMA3-70B-Instruct, our model achieved state-of-the-art performance for prompting-based methods on multi-hop table-text QA.
Jayetri Bardhan, Bushi Xiao, Daisy Zhe Wang
ICMLA3
2025 CReLeRI: Explainable, Concept-centric, Representation, Learning, Reasoning, and Interaction Video Analysis System
abstract
Existing video analysis models often lack explainability, perform poorly on long videos, and frequently hallucinate. Commercial solutions are closed-source and costly. We introduce CReLeRI, an open-source system for action detection in untrimmed videos. CReLeRI segments videos using scene and action transitions, detects actions and their arguments and grounds them in 3D space to improve interpretability and reduce hallucinations. The system promotes transparency and trust in AI-driven analysis of complex, real-world videos. A demonstration video is also available.
Michael Francis Perez, Yichi Yang, Yuheng Zha, Enze Ma, Danish Nisar Ahmed Tamboli, Haodi Ma, Reza Shahriari, Vyom Pathak, Dzmitry Kasinets, Rohith Venkatakrishnan, Daisy Zhe Wang, Jaime Ruiz 0002, Eric D. Ragan, Zhiting Hu, Eric P. Xing, Jun-Yan Zhu
ACM Multimedia11
2025 LaPuda: LLM-Enabled Policy-Based Query Optimizer for Multi-modal Data
Yifan Wang 0012, Haodi Ma, Daisy Zhe Wang
PAKDD (3)3
2024 M3: A Multi-Task Mixed-Objective Learning Framework for Open-Domain Multi-Hop Dense Sentence Retrieval
abstract
In recent research, contrastive learning has proven to be a highly effective method for representation learning and is widely used for dense retrieval. However, we identify that relying solely on contrastive learning can lead to suboptimal retrieval performance. On the other hand, despite many retrieval datasets supporting various learning objectives beyond contrastive learning, combining them efficiently in multi-task learning scenarios can be challenging. In this paper, we introduce M3, an advanced recursive Multi-hop dense sentence retrieval system built upon a novel Multi-task Mixed-objective approach for dense text representation learning, addressing the aforementioned challenges. Our approach yields state-of-the-art performance on a large-scale open-domain fact verification benchmark dataset, FEVER.
Anthony M. Colas, Christan Grant, Daisy Zhe Wang
LREC/COLING4
2023 Can Knowledge Graphs Simplify Text?
abstract
Knowledge Graph (KG)-to-Text Generation has seen recent improvements in generating fluent and informative sentences which describe a given KG. As KGs are widespread across multiple domains and contain important entity-relation information, and as text simplification aims to reduce the complexity of a text while preserving the meaning of the original text, we propose KGSimple, a novel approach to unsupervised text simplification which infuses KG-established techniques in order to construct a simplified KG path and generate a concise text which preserves the original input's meaning. Through an iterative and sampling KG-first approach, our model is capable of simplifying text when starting from a KG by learning to keep important information while harnessing KG-to-text generation to output fluent and descriptive sentences. We evaluate various settings of the KGSimple model on currently-available KG-to-text datasets, demonstrating its effectiveness compared to unsupervised text simplification models which start with a given complex text. Our code is available on GitHub.
Anthony M. Colas, Haodi Ma, Xuanli He, Daisy Zhe Wang
CIKM5
2023 Learned Accelerator Framework for Angular-Distance-Based High-Dimensional DBSCAN
Yifan Wang 0012, Daisy Zhe Wang
EDBT2
2023 Reasoning with Language Model is Planning with World Model
abstract
Large language models (LLMs) have shown remarkable reasoning capabilities, particularly with chain-of-thought (CoT) prompting.However, LLMs sometimes still struggle with problems that are easy for humans, such as generating action plans to achieve given goals in an environment, or performing complex math or logical reasoning.The deficiency stems from the key fact that LLMs lack an internal world model to predict the world state (e.g., environment status, intermediate variable values) and simulate long-term outcomes of actions.This prevents LLMs from performing deliberate planning akin to human brains, which involves exploring alternative reasoning paths, anticipating future states and rewards, and iteratively refining existing reasoning steps.To overcome the limitations, we propose a new LLM reasoning framework, Reasoning via Planning (RAP).RAP repurposes the LLM as both a world model and a reasoning agent, and incorporates a principled planning algorithm based on Monte Carlo Tree Search for strategic exploration in the vast reasoning space.During reasoning, the LLM (as agent) incrementally builds a reasoning tree under the guidance of the LLM (as world model) and rewards, and efficiently obtains a high-reward reasoning path with a proper balance between exploration vs. exploitation.We apply RAP to various challenging reasoning problems including plan generation, math reasoning, and logical inference, and demonstrate its superiority over strong baselines.RAP with LLaMA-33B even surpasses CoT with GPT-4, achieving 33% relative improvement in a plan generation setting. 1
Shibo Hao, Yi Gu 0002, Haodi Ma, Joshua Jiahua Hong, Zhen Wang 0041, Daisy Zhe Wang, Zhiting Hu
EMNLP6
2023 MythQA: Query-Based Large-Scale Check-Worthy Claim Detection through Multi-Answer Open-Domain Question Answering
abstract
Check-worthy claim detection aims at providing plausible misinformation to the downstream fact-checking systems or human experts to check. This is a crucial step toward accelerating the fact-checking process. Many efforts have been put into how to identify check-worthy claims from a small scale of pre-collected claims, but how to efficiently detect check-worthy claims directly from a large-scale information source, such as Twitter, remains underexplored. To fill this gap, we introduce MythQA, a new multi-answer open-domain question answering(QA) task that involves contradictory stance mining for query-based large-scale check-worthy claim detection. The idea behind this is that contradictory claims are a strong indicator of misinformation that merits scrutiny by the appropriate authorities. To study this task, we construct TweetMythQA, an evaluation dataset containing 522 factoid multi-answer questions based on controversial topics. Each question is annotated with multiple answers. Moreover, we collect relevant tweets for each distinct answer, then classify them into three categories: "Supporting", "Refuting", and "Neutral". In total, we annotated 5.3K tweets. Contradictory evidence is collected for all answers in the dataset. Finally, we present a baseline system for MythQA and evaluate existing NLP models for each system component using the TweetMythQA dataset. We provide initial benchmarks and identify key challenges for future models to improve upon. Code and data are available at: https://github.com/TonyBY/Myth-QA
Anthony M. Colas, Daisy Zhe Wang
SIGIR3
2023 Improving Rare Tree Species Classification Using Domain Knowledge
abstract
Forest inventory forms the foundation of forest management. Remote sensing (RS) is an efficient means of measuring forest parameters at scale. Remotely sensed species classification can be used to estimate species abundances, distributions, and to better approximate metrics such as above ground biomass. State of the art methods of RS species classification rely on deep learning models such as convolutional neural networks (CNN). These models have 2 major drawbacks: they require large samples of each species to classify well and they lack explainablity. Therefore, rare species are poorly classified causing poor approximations of their associated parameters. We show that the classification of rare species can be improved by as much as 8 F1-points using a neuro-symbolic (NS) approach that combines CNNs with a NS framework. The framework allows for the incorporation of domain knowledge into the model through the use of mathematically represented rules, improving model explainability.
Ira Harmon, Sergio Marconi, Ben G. Weinstein, Daisy Zhe Wang, Ethan P. White, Stephanie A. Bohlman
IEEE Geosci. Remote. Sens. Lett.5
2022 Extensible Database Simulator for Fast Prototyping In-Database Algorithms
abstract
With the rapid increasing of data scale, in-database analytics and learning has become one of the most studied topics in data science community, because of its significance on reducing the gap between the management and the analytics of data. By extending the capability of database on analytics and learning, data scientists can save much time on exchanging data between databases and external analytic tools. For this goal, researchers are attempting to integrate more data science algorithms into database. However, implementing the algorithms in mainstream databases is super time-consuming, since the developers often have to make a deep dive into the database kernels. Thus there are demands for an easy-to-extend database simulator to help fast prototype and verify the in-database algorithms before implementing them in real databases.
Yifan Wang 0012, Daisy Zhe Wang
CIKM2
2022 GAP: A Graph-aware Language Model Framework for Knowledge Graph-to-Text Generation
abstract
Recent improvements in KG-to-text generation are due to additional auxiliary pre-training tasks designed to give the fine-tune task a boost in performance. These tasks require extensive computational resources while only suggesting marginal improvements. Here, we demonstrate that by fusing graph-aware elements into existing pre-trained language models, we are able to outperform state-of-the-art models and close the gap imposed by additional pre-training tasks. We do so by proposing a mask structure to capture neighborhood information and a novel type encoder that adds a bias to the graph-attention weights depending on the connection type. Experiments on two KG-to-text benchmark datasets show our models are competitive while involving fewer parameters and no additional pre-training tasks. By formulating the problem as a framework, we can interchange the various proposed components and begin interpreting KG-to-text generative models based on the topological and type information found in a graph.
Anthony M. Colas, Mehrdad Alvandipour, Daisy Zhe Wang
COLING3
2022 DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
abstract
This paper develops the first question answering dataset (DrugEHRQA) containing question-answer pairs from both structured tables and unstructured notes from a publicly available Electronic Health Record (EHR). EHRs contain patient records, stored in structured tables and unstructured clinical notes. The information in structured and unstructured EHRs is not strictly disjoint: information may be duplicated, contradictory, or provide additional context between these sources. Our dataset has medication-related queries, containing over 70,000 question-answer pairs. To provide a baseline model and help analyze the dataset, we have used a simple model (MultimodalEHRQA) which uses the predictions of a modality selection network to choose between EHR tables and clinical notes to answer the questions. This is used to direct the questions to the table-based or text-based state-of-the-art QA model. In order to address the problem arising from complex, nested queries, this is the first time Relation-Aware Schema Encoding and Linking for Text-to-SQL Parsers (RAT-SQL) has been used to test the structure of query templates in EHR data. Our goal is to provide a benchmark dataset for multi-modal QA systems, and to open up new avenues of research in improving question answering over EHR structured data by using context from unstructured clinical data.
Jayetri Bardhan, Anthony M. Colas, Kirk Roberts, Daisy Zhe Wang
LREC4
2022 LIDER: An Efficient High-dimensional Learned Index for Large-scale Dense Passage Retrieval
abstract
Passage retrieval has been studied for decades, and many recent approaches of passage retrieval are using dense embeddings generated from deep neural models, called "dense passage retrieval". The state-of-the-art end-to-end dense passage retrieval systems normally deploy a deep neural model followed by an approximate nearest neighbor (ANN) search module. The model generates embeddings of the corpus and queries, which are then indexed and searched by the high-performance ANN module. With the increasing data scale, the ANN module unavoidably becomes the bottleneck on efficiency. An alternative is the learned index, which achieves significantly high search efficiency by learning the data distribution and predicting the target data location. But most of the existing learned indexes are designed for low dimensional data, which are not suitable for dense passage retrieval with high-dimensional dense embeddings. In this paper, we propose LIDER , an efficient high-dimensional L earned I ndex for large-scale DE nse passage R etrieval. LIDER has a clustering-based hierarchical architecture formed by two layers of core models. As the basic unit of LIDER to index and search data, a core model includes an adapted recursive model index (RMI) and a dimension reduction component which consists of an extended SortingKeys-LSH (SK-LSH) and a key re-scaling module. The dimension reduction component reduces the high-dimensional dense embeddings into one-dimensional keys and sorts them in a specific order, which are then used by the RMI to make fast prediction. Experiments show that LIDER has a higher search speed with high retrieval quality comparing to the state-of-the-art ANN indexes on passage retrieval tasks, e.g., on large-scale data it achieves 1.2x search speed and significantly higher retrieval quality than the fastest baseline in our evaluation. Furthermore, LIDER has a better capability of speed-quality trade-off.
Yifan Wang 0012, Haodi Ma, Daisy Zhe Wang
Proc. VLDB Endow.3
2022 Injecting Domain Knowledge Into Deep Neural Networks for Tree Crown Delineation
abstract
Automated individual tree crown (ITC) delineation plays an important role in forest remote sensing. Accurate ITC delineation benefits biomass estimation, allometry estimation, and species classification among other forest related tasks, all of which are used to monitor forest health and make important decisions in forest management. In this paper, we introduce Neuro-Symbolic DeepForest, a convolutional neural network (CNN) based ITC delineation algorithm that uses a neuro-symbolic framework to inject domain knowledge (represented as rules written in probabilistic soft logic) into a CNN. We create rules that encode concepts for competition, allometry, constrained growth, mean ITC area, and crown color. Our results show that the delineation model learns from the annotated training data as well as the rules and that under some conditions, the injection of rules improves model performance and affects model bias. We then analyze the effects of each rule on its related aspects of model performance. We find that the addition of domain data can improve F1 by as much as 4 F1-points, reduce the KL-divergence between ground-truth and predicted area distributions, and reduce the aggregate error in area between ground-truth and predicted delineations.
Ira Harmon, Sergio Marconi, Ben G. Weinstein, Sarah Graves, Daisy Zhe Wang, Alina Zare, Stephanie A. Bohlman, Ethan P. White
IEEE Trans. Geosci. Remote. Sens.5
2021 ChronoR: Rotation Based Temporal Knowledge Graph Embedding
abstract
Despite the importance and abundance of temporal knowledge graphs, most of the current research has been focused on reasoning on static graphs. In this paper, we study the challenging problem of inference over temporal knowledge graphs. In particular, the task of temporal link prediction. In general, this is a difficult task due to data non-stationarity, data heterogeneity, and its complex temporal dependencies. We propose Chronological Rotation embedding (ChronoR), a novel model for learning representations for entities, relations, and time. Learning dense representations is frequently used as an efficient and versatile method to perform reasoning on knowledge graphs. The proposed model learns a k-dimensional rotation transformation parametrized by relation and time, such that after each fact's head entity is transformed using the rotation, it falls near its corresponding tail entity. By using high dimensional rotation as its transformation operator, ChronoR captures rich interaction between the temporal and multi-relational characteristics of a Temporal Knowledge Graph. Experimentally, we show that ChronoR is able to outperform many of the state-of-the-art methods on the benchmark datasets for temporal knowledge graph link prediction.
Ali Sadeghian, Mohammadreza Armandpour, Anthony M. Colas, Daisy Zhe Wang
AAAI4
2020 TutorialVQA: Question Answering Dataset for Tutorial Videos
abstract
Despite the number of currently available datasets on video-question answering, there still remains a need for a dataset involving multi-step and non-factoid answers. Moreover, relying on video transcripts remains an under-explored topic. To adequately address this, we propose a new question answering task on instructional videos, because of their verbose and narrative nature. While previous studies on video question answering have focused on generating a short text as an answer, given a question and video clip, our task aims to identify a span of a video segment as an answer which contains instructional details with various granularities. This work focuses on screencast tutorial videos pertaining to an image editing program. We introduce a dataset, TutorialVQA, consisting of about 6,000 manually collected triples of (video, question, answer span). We also provide experimental results with several baseline algorithms using the video transcripts. The results indicate that the task is challenging and call for the investigation of new algorithms.
Anthony M. Colas, Seokhwan Kim, Franck Dernoncourt, Siddhesh Gupte, Daisy Zhe Wang, Doo Soon Kim
LREC5
2019 Using FHIR to Construct a Corpus of Clinical Questions Annotated with Logical Forms and Answers
Sarvesh Soni, Meghana Gudala, Daisy Zhe Wang, Kirk Roberts
AMIA3
2019 DRUM: End-To-End Differentiable Rule Mining On Knowledge Graphs
abstract
In this paper, we study the problem of learning probabilistic logical rules for inductive and interpretable link prediction. Despite the importance of inductive link prediction, most previous works focused on transductive link prediction and cannot manage previously unseen entities. Moreover, they are black-box models that are not easily explainable for humans. We propose DRUM, a scalable and differentiable approach for mining first-order logical rules from knowledge graphs that resolves these problems. We motivate our method by making a connection between learning confidence scores for each rule and low-rank tensor approximation. DRUM uses bidirectional RNNs to share useful information across the tasks of learning rules for different relations. We also empirically demonstrate the efficiency of DRUM over existing rule mining methods for inductive link prediction on a variety of benchmark datasets.
Ali Sadeghian, Mohammadreza Armandpour, Patrick Ding, Daisy Zhe Wang
NeurIPS4
2019 Mining Rules Incrementally over Large Knowledge Bases
abstract
Multiple web-scale Knowledge Bases, e.g., Freebase, YAGO, NELL, have been constructed using semi-supervised or unsupervised information extraction techniques and many of them, despite their large sizes, are continuously growing. Much research effort has been put into mining inference rules from knowledge bases. To address the task of rule mining over evolving web-scale knowledge bases, we propose a parallel incremental rule mining framework. Our approach is able to efficiently mine rules based on the relational model and apply updates to large knowledge bases; we propose an alternative metric that reduces computation complexity without compromising quality; we apply multiple optimization techniques that reduce runtime by more than 2 orders of magnitude. Experiments show that our approach efficiently scales to web-scale knowledge bases and saves over 90% time compared to the state-of-the-art batch rule mining system. We also apply our optimization techniques to the batch rule mining algorithm, reducing runtime by more than half compared to the state-of-the-art. To the best of our knowledge, our incremental rule mining system is the first that handles updates to web-scale knowledge bases.
Xiaofeng Zhou 0003, Ali Sadeghian, Daisy Zhe Wang
SDM3
2018 Ten Years of WebTables
abstract
In 2008, we wrote about WebTables, an effort to exploit the large and diverse set of structured databases casually published online in the form of HTML tables. The past decade has seen a flurry of research and commercial activities around the WebTables project itself, as well as the broad topic of informal online structured data. In this paper, we 1 will review the WebTables project, and try to place it in the broader context of the decade of work that followed. We will also show how the progress over the past ten years sets up an exciting agenda for the future, and will draw upon many corners of the data management community.
Michael J. Cafarella, Alon Y. Halevy, Hongrae Lee, Jayant Madhavan, Cong Yu 0001, Daisy Zhe Wang, Eugene Wu 0002
Proc. VLDB Endow.6
2017 Extracting Visual Knowledge from the Web with Multimodal Learning
abstract
We consider the problem of automatically extracting visual objects from web images. Despite the extraordinary advancement in deep learning, visual object detection remains a challenging task. To overcome the deficiency of pure visual techniques, we propose to make use of meta text surrounding images on the Web for enhanced detection accuracy. In this paper we present a multimodal learning algorithm to integrate text information into visual knowledge extraction. To demonstrate the effectiveness of our approach, we developed a system that takes raw webpages as input, and automatically extracts visual knowledge (e.g. object bounding boxes) from tens of millions of images crawled from the Web. Experimental results based on 46 object categories show that the extraction precision is improved significantly from 73% (with state-of-the-art deep learning programs) to 81%, which is equivalent to a 31% reduction in error rates.
Dihong Gong, Daisy Zhe Wang
IJCAI2
2017 Multimodal Learning for Web Information Extraction
abstract
We consider the problem of extracting text instances of predefined categories from the Web. Instances of a category may be scattered across thousands of independent sources in many different formats with potential noises, which makes open-domain information extraction a challenging problem. Learning syntactic rules like "cities such as _" or "_ is a city" in a semi-supervised manner using a few labeled examples is usually unreliable because 1) high quality syntactic rules are rare and 2) the learning task is usually underconstrained. To address these problems, in this paper we propose to learn multimodal rules to combat the difficulty of syntactic rules. The multimodal rules are learned from information sources of different modalities, which is motivated by an intuition that information that is difficult to disambiguate correctly in one modality may be easily recognized in another. To demonstrate the effectiveness of this method, we have built a sophisticated end-to-end multimodal information extraction system that takes unannotated raw web pages as input, and generates a set of extracted instances as outputs. More specifically, our system learns reliable relationship between multimodal information by multimodal relation analysis on big unstructured data. Based on the learned relationship, we further train a set of multimodal rules for information extraction. Experimental evaluation shows that a greater accuracy for information extraction can be achieved by multimodal learning.
Dihong Gong, Daisy Zhe Wang
ACM Multimedia2
2017 In-database batch and query-time inference over probabilistic graphical models using UDA-GIST
Xiaofeng Zhou 0003, Daisy Zhe Wang, Christan Grant, Alin Dobra, Christopher Dudley
VLDB J.3
2016 Consensus Maximization Fusion of Probabilistic Information Extractors
abstract
Current approaches to Information Extraction (IE) are capable of extracting large amounts of facts with associated probabilities.Because no current IE system is perfect, complementary and conflicting facts are obtained when different systems are run over the same data.Knowledge Fusion (KF) is the problem of aggregating facts from different extractors.Existing methods approach KF using supervised learning or deep linguistic knowledge, which either lack sufficient data or are not robust enough.We propose a semi-supervised application of Consensus Maximization to the KF problem, using a combination of supervised and unsupervised models.Consensus Maximization Fusion (CM Fusion) is able to promote high quality facts and eliminate incorrect ones.We demonstrate the effectiveness of our system on the NIST Slot Filler Validation contest, which seeks to evaluate and aggregate multiple independent information extractors.Our system achieved the highest F1 score relative to other system submissions.
Miguel E. Rodríguez, Sean Goldberg, Daisy Zhe Wang
HLT-NAACL3
2016 Ontological Pathfinding
abstract
Recent years have seen a drastic rise in the construction of web-scale knowledge bases (e.g., Freebase, YAGO, DBPedia). These knowledge bases store structured information about real-world people, places, organizations, etc. However, due to limitations of human knowledge and information extraction algorithms, these knowledge bases are still far from complete. In this paper, we study the problem of mining first-order inference rules to facilitate knowledge expansion. We propose the Ontological Pathfinding algorithm (OP) that scales to web-scale knowledge bases via a series of parallelization and optimization techniques: a relational knowledge base model to apply inference rules in batches, a new rule mining algorithm that parallelizes the join queries, a novel partitioning algorithm to break the mining tasks into smaller independent sub-tasks, and a pruning strategy to eliminate unsound and resource-consuming rules before applying them. Combining these techniques, we develop the first rule mining system that scales to Freebase, the largest public knowledge base with 112 million entities and 388 million facts. We mine 36,625 inference rules in 34 hours; no existing approach achieves this scale.
Yang Chen 0003, Sean Goldberg, Daisy Zhe Wang, Soumitra Siddharth Johri
SIGMOD Conference3
2016 SigmaKB: Multiple Probabilistic Knowledge Base Fusion
abstract
The interest in integrating web-scale knowledge bases (KBs) has intensified in the last several years. Research has focused on knowledge base completion between two KBs with complementary information, lacking any notion of uncertainty or method of handling conflicting information. We present S igma KB, a knowledge base system that utilizes Consensus Maximization Fusion and user feedback to integrate and improve the query results of a total of 71 KBs. This paper presents the architecture and demonstration details.
Miguel E. Rodríguez, Sean Goldberg, Daisy Zhe Wang
Proc. VLDB Endow.3
2016 ArchimedesOne: Query Processing over Probabilistic Knowledge Bases
abstract
Knowledge bases are becoming increasingly important in structuring and representing information from the web. Meanwhile, web-scale information poses significant scalability and quality challenges to knowledge base systems. To address these challenges, we develop a probabilistic knowledge base system, A rchimedes O ne , by scaling up the knowledge expansion and statistical inference algorithms. We design a web interface for users to query and update large knowledge bases. In this paper, we demonstrate the A rchimedes O ne system to showcase its efficient query and inference engines. The demonstration serves two purposes: 1) to provide an interface for users to interact with A rchimedes O ne through load, search, and update queries; and 2) to validate our approaches of knowledge expansion by applying inference rules in batches using relational operations and query-driven inference by focusing computation on the query facts. We compare A rchimedes O ne with state-of-the-art approaches using two knowledge bases: NELL-sports with 4.5 million facts and Reverb-Sherlock with 15 million facts.
Xiaofeng Zhou 0003, Yang Chen 0003, Daisy Zhe Wang
Proc. VLDB Endow.3
2016 ScaLeKB: scalable learning and inference over large knowledge bases
Yang Chen 0003, Daisy Zhe Wang, Sean Goldberg
VLDB J.2
2015 Probabilistic Ensemble Fusion for Multimodal Word Sense Disambiguation
abstract
With the advent of abundant multimedia data on the Internet, there have been research efforts on multimodal machine learning to utilize data from different modalities. Current approaches mostly focus on developing models to fuse low-level features from multiple modalities and learn unified representation from different modalities. But most related work failed to justify why we should use multimodal data and multimodal fusion, and few of them leveraged the complementary relation among different modalities. In this paper, we first identify the correlative and complementary relations among multiple modalities. Then we propose a probabilistic ensemble fusion model to capture the complementary relation between two modalities (images and text). Experimental results on the UIUC-ISD dataset show our ensemble approach outperforms approaches using only single modality. Word sense disambiguation (WSD) is the use case we studied to demonstrate the effectiveness of our probabilistic ensemble fusion model.
Daisy Zhe Wang, Ishan Patwa, Dihong Gong, Chunsheng Victor Fang
ISM2
2015 UDA-GIST: An In-database Framework to Unify Data-Parallel and State-Parallel Analytics
abstract
Enterprise applications need sophisticated in-database analytics in addition to traditional online analytical processing from a database. To meet customers' pressing demands, database vendors have been pushing advanced analytical techniques into databases. Most major DBMSes offer User-Defined Aggregate (UDA), a data-driven operator, to implement many of the analytical techniques in parallel. However, UDAs can not be used to implement statistical algorithms such as Markov chain Monte Carlo (MCMC), where most of the work is performed by iterative transitions over a large state that can not be naively partitioned due to data dependency. Typically, this type of statistical algorithm requires pre-processing to setup the large state in the first place and demands post-processing after the statistical inference. This paper presents General Iterative State Transition (GIST), a new database operator for parallel iterative state transitions over large states. GIST receives a state constructed by a UDA, and then performs rounds of transitions on the state until it converges. A final UDA performs post-processing and result extraction. We argue that the combination of UDA and GIST (UDA-GIST) unifies data-parallel and state-parallel processing in a single system, thus significantly extending the analytical capabilities of DBMSes. We exemplify the framework through two high-profile applications: cross-document coreference and image denoising. We show that the in-database framework allows us to tackle a 27 times larger problem than solved by the state-of-the-art for the first application and achieves 43 times speedup over the state-of-the-art for the second application.
Daisy Zhe Wang, Alin Dobra, Christopher Dudley
Proc. VLDB Endow.2
2014 Knowledge expansion over probabilistic knowledge bases
abstract
Information extraction and human collaboration techniques are widely applied in the construction of web-scale knowledge bases. However, these knowledge bases are often incomplete or uncertain. In this paper, we present ProbKB, a probabilistic knowledge base designed to infer missing facts in a scalable, probabilistic, and principled manner using a relational DBMS. The novel contributions we make to achieve scalability and high quality are: 1) We present a formal definition and a novel relational model for probabilistic knowledge bases. This model allows an efficient SQL-based inference algorithm for knowledge expansion that applies inference rules in batches; 2) We implement ProbKB on massive parallel processing databases to achieve further scalability; and 3) We combine several quality control methods that identify erroneous rules, facts, and ambiguous entities to improve the precision of inferred facts. Our experiments show that ProbKB system outperforms the state-of-the-art inference engine in terms of both performance and quality.
Yang Chen 0003, Daisy Zhe Wang
SIGMOD Conference2
2013 A Probabilistic Knowledge Base System
Daisy Zhe Wang
CIDR1
2013 CASTLE: Crowd-Assisted System for Text Labeling and Extraction
abstract
The amount of text data has been growing exponentially and with it the demand for improved information extraction (IE) efforts to analyze and query such data. While automatic IE systems have proven useful in controlled experiments, in practice the gap between machine learning extraction and human extraction is still quite large. In this paper, we propose a system that uses crowdsourcing techniques to help close this gap. One of the fundamental issues inherent in using a large-scale human workforce is deciding the optimal questions to pose to the crowd. We demonstrate novel solutions using mutual information and token clustering techniques in the domain of bibliographic citation extraction. Our experiments show promising results in using crowd assistance as a cost-effective way to close up the ”last mile” between extraction systems and a human annotator.
Sean Goldberg, Daisy Zhe Wang, Tim Kraska
HCOMP2
2012 MADden: query-driven statistical text analytics
abstract
In many domains, structured data and unstructured text are both important natural resources to fuel data analysis. Statistical text analysis needs to be performed over text data to extract structured information for further query processing. Typically, developers will need to connect multiple tools to build off-line batch processes to perform text analytic tasks. MADden is an integrated system developed for relational database systems such as PostgreSQL and Greenplum for real-time ad hoc query processing over structured and unstructured data. MADden implements four important text analytic functions that we have contributed to the MADlib open source library for textual analytics. In this demonstration, we will show the capability of the MADden text analytic library using computational journalism as the driving application. We show real-time declarative query processing over multiple data sources with both structured and text information.
Christan Grant, Joir-dan Gumbs, Daisy Zhe Wang, George Chitouras
CIKM4
2012 A Machine Learning Based Topic Exploration and Categorization on Surveys
abstract
This paper describes an automatic topic extraction, categorization, and relevance ranking model for multi-lingual surveys and questions that exploits machine learning algorithms such as topic modeling and fuzzy clustering. Automatically generated question and survey categories are used to build question banks and category-specific survey templates. First, we describe different pre-processing steps we considered for removing noise in the multilingual survey text. Second, we explain our strategy to automatically extract survey categories from surveys based on topic models. Third, we describe different methods to cluster questions under survey categories and group them based on relevance. Last, we describe our experimental results on a large group of unique, real-world survey datasets from the German, Spanish, French, and Portuguese languages and our refining methods to determine meaningful and sensible categories for building question banks. We conclude this document with possible enhancements to the current system and impacts in the business domain.
Clint P. George, Daisy Zhe Wang, Joseph N. Wilson, Liana M. Epstein, Philip Garland, Annabell Suh
ICMLA (2)2
2012 The MADlib Analytics Library or MAD Skills, the SQL
abstract
MADlib is a free, open-source library of in-database analytic methods. It provides an evolving suite of SQL-based algorithms for machine learning, data mining and statistics that run at scale within a database engine, with no need for data import/export to other tools. The goal is for MADlib to eventually serve a role for scalable database systems that is similar to the CRAN library for R: a community repository of statistical methods, this time written with scale and parallelism in mind. In this paper we introduce the MADlib project, including the background that led to its beginnings, and the motivation for its open-source nature. We provide an overview of the library's architecture and design patterns, and provide a description of various statistical methods in that context. We include performance and speedup results of a core design pattern from one of those methods over the Greenplum parallel DBMS on a modest-sized test cluster. We then report on two initial efforts at incorporating academic research into MADlib, which is one of the project's goals. MADlib is freely available at http://madlib.net, and the project is open for contributions of both new methods, and ports to additional database platforms.
Joseph M. Hellerstein, Christopher Ré, Florian Schoppmann, Daisy Zhe Wang, Eugene Fratkin, Aleksander Gorajek, Kee Siong Ng, Caleb Welton, Xixuan Feng, Arun Kumar 0001
Proc. VLDB Endow.4
2011 Selectivity estimation for extraction operators over text data
abstract
Recently, there has been increasing interest in extending relational query processing to efficiently support extraction operators, such as dictionaries and regular expressions, over text data. Many text processing queries are sophisticated in that they involve multiple extraction and join operators, resulting in many possible query plans. However, there has been little research on building the selectivity or cost estimation for these extraction operators, which is crucial for an optimizer to pick a good query plan. In this paper, we define the problem of selectivity estimation for dictionaries and regular expressions, and propose to develop document synopses over a text corpus, from which the selectivity can be estimated. We first adapt the language models in the Natural Language Processing literature to form the top-k n-gram synopsis as the baseline document synopsis. Then we develop two classes of novel document synopses: stratified bloom filter synopsis and roll-up synopsis. We also develop techniques to decompose a complicated regular expression into subparts to achieve more effective and accurate estimation. We conduct experiments over the Enron email corpus using both real-world and synthetic workloads to compare the accuracy of the selectivity estimation over different classes and variations of synopses. The results show that, the top-k stratified bloom filter synopsis and the roll-up synopsis is the most accurate in dictionary and regular expression selectivity estimation respectively.
Daisy Zhe Wang, Yunyao Li 0001, Frederick Reiss 0001, Shivakumar Vaithyanathan
ICDE1
2011 Hybrid in-database inference for declarative information extraction
abstract
In the database community, work on information extraction (IE) has centered on two themes: how to effectively manage IE tasks, and how to manage the uncertainties that arise in the IE process in a scalable manner. Recent work has proposed a probabilistic database (PDB) based declarative IE system that supports a leading statistical IE model, and an associated inference algorithm to answer top-k-style queries over the probabilistic IE outcome. Still, the broader problem of effectively supporting general probabilistic inference inside a PDB-based declarative IE system remains open. In this paper, we explore the in-database implementations of a wide variety of inference algorithms suited to IE, including two Markov chain Monte Carlo algorithms, the Viterbi and the sum-product algorithms. We describe the rules for choosing appropriate inference algorithms based on the model, the query and the text, considering the trade-off between accuracy and runtime. Based on these rules, we describe a hybrid approach to optimize the execution of a single probabilistic IE query to employ different inference algorithms appropriate for different records. We show that our techniques can achieve up to 10-fold speedups compared to the non-hybrid solutions proposed in the literature.
Daisy Zhe Wang, Michael J. Franklin, Minos N. Garofalakis, Joseph M. Hellerstein, Michael L. Wick
SIGMOD Conference1
2010 Probabilistic declarative information extraction
abstract
Unstructured text represents a large fraction of the world's data. It often contains snippets of structured information (e.g., people's names and zip codes). Information Extraction (IE) techniques identify such structured information in text. In recent years, database research has pursued IE on two fronts: declarative languages and systems for managing IE tasks, and probabilistic databases for querying the output of IE. In this paper, we make the first step to merge these two directions, without loss of statistical robustness, by implementing a state-of-the-art statistical IE model - Conditional Random Fields (CRF) - in the setting of a Probabilistic Database that treats statistical models as first-class data objects. We show that the Viterbi algorithm for CRF inference can be specified declaratively in recursive SQL. We also show the performance benefits relative to a standalone open-source Viterbi implementation. This work opens up the optimization opportunities for queries involving both inference and relational operators over IE models.
Daisy Zhe Wang, Eirinaios Michelakis, Michael J. Franklin, Minos N. Garofalakis, Joseph M. Hellerstein
ICDE1
2010 Querying Probabilistic Information Extraction
abstract
Recently, there has been increasing interest in extending relational query processing to include data obtained from unstructured sources. A common approach is to use stand-alone Information Extraction (IE) techniques to identify and label entities within blocks of text; the resulting entities are then imported into a standard database and processed using relational queries. This two-part approach, however, suffers from two main drawbacks. First, IE is inherently probabilistic, but traditional query processing does not properly handle probabilistic data, resulting in reduced answer quality. Second, performance inefficiencies arise due to the separation of IE from query processing. In this paper, we address these two problems by building on an in-database implementation of a leading IE model---Conditional Random Fields using the Viterbi inference algorithm. We develop two different query approaches on top of this implementation. The first uses deterministic queries over maximum-likelihood extractions, with optimizations to push the relational operators into the Viterbi algorithm. The second extends the Viterbi algorithm to produce a set of possible extraction "worlds", from which we compute top-kprobabilistic query answers. We describe these approaches and explore the trade-offs of efficiency and effectiveness between them using two datasets.
Daisy Zhe Wang, Michael J. Franklin, Minos N. Garofalakis, Joseph M. Hellerstein
Proc. VLDB Endow.1
2009 Functional Dependency Generation and Applications in Pay-As-You-Go Data Integration Systems
Daisy Zhe Wang, Xin Dong 0001, Anish Das Sarma, Michael J. Franklin, Alon Y. Halevy
WebDB1
2008 Uncovering the Relational Web
Michael J. Cafarella, Alon Y. Halevy, Daisy Zhe Wang, Eugene Wu 0002
WebDB4
2008 WebTables: exploring the power of tables on the web
abstract
The World-Wide Web consists of a huge number of unstructured documents, but it also contains structured data in the form of HTML tables. We extracted 14.1 billion HTML tables from Google's general-purpose web crawl, and used statistical classification techniques to find the estimated 154M that contain high-quality relational data. Because each relational table has its own "schema" of labeled and typed columns, each such table can be considered a small structured database. The resulting corpus of databases is larger than any other corpus we are aware of, by at least five orders of magnitude. We describe the WEBTABLES system to explore two fundamental questions about this collection of databases. First, what are effective techniques for searching for structured data at search-engine scales? Second, what additional power can be derived by analyzing such a huge corpus? First, we develop new techniques for keyword search over a corpus of tables, and show that they can achieve substantially higher relevance than solutions based on a traditional search engine. Second, we introduce a new object derived from the database corpus: the attribute correlation statistics database (AcsDB) that records corpus-wide statistics on co-occurrences of schema elements. In addition to improving search relevance, the AcsDB makes possible several novel applications: schema auto-complete , which helps a database designer to choose schema elements; attribute synonym finding , which automatically computes attribute synonym pairs for schema matching; and join-graph traversal , which allows a user to navigate between extracted schemas using automatically-generated join links.
Michael J. Cafarella, Alon Y. Halevy, Daisy Zhe Wang, Eugene Wu 0002
Proc. VLDB Endow.3
2008 BayesStore: managing large, uncertain data repositories with probabilistic graphical models
abstract
Several real-world applications need to effectively manage and reason about large amounts of data that are inherently uncertain. For instance, pervasive computing applications must constantly reason about volumes of noisy sensory readings for a variety of reasons, including motion prediction and human behavior modeling. Such probabilistic data analyses require sophisticated machine-learning tools that can effectively model the complex spatio/temporal correlation patterns present in uncertain sensory data. Unfortunately, to date, most existing approaches to probabilistic database systems have relied on somewhat simplistic models of uncertainty that can be easily mapped onto existing relational architectures: Probabilistic information is typically associated with individual data tuples, with only limited or no support for effectively capturing and reasoning about complex data correlations. In this paper, we introduce BayesStore, a novel probabilistic data management architecture built on the principle of handling statistical models and probabilistic inference tools as first-class citizens of the database system. Adopting a machine-learning view, BAYESSTORE employs concise statistical relational models to effectively encode the correlation patterns between uncertain data, and promotes probabilistic inference and statistical model manipulation as part of the standard DBMS operator repertoire to support efficient and sound query processing. We present BAYESSTORE's uncertainty model based on a novel, first-order statistical model , and we redefine traditional query processing operators, to manipulate the data and the probabilistic models of the database in an efficient manner. Finally, we validate our approach, by demonstrating the value of exploiting data correlations during query processing, and by evaluating a number of optimizations which significantly accelerate query processing.
Daisy Zhe Wang, Eirinaios Michelakis, Minos N. Garofalakis, Joseph M. Hellerstein
Proc. VLDB Endow.1