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Joseph R. Madsen

dblp:27/5817 · DBLP profile ↗
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5ranked-venue papers
0as first author
1since 2021 · last 2024
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 4 · 1 since 2021Systems, architecture and hardware · 2Graphics, computer vision, multimedia, augmented reality and games · 1Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
2 papers
Information extraction and text analysis · 86% Motion planning and robot control · 14%
Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 86% Medical and health informatics · 14%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Natural language and speech › Information extraction and text analysis › syntactic parsing
dependency parsing
0.812024
Brain Treebank: Large-scale intracranial recordings from naturalistic language stimuli · NeurIPS 2024
Bioinformatics and computational biology › neuroscience
neuroinformatics
0.812024
Brain Treebank: Large-scale intracranial recordings from naturalistic language stimuli · NeurIPS 2024
Robotics › Motion planning and robot control › design optimization
robot design optimization
0.112011
Algorithms for design of continuum robots using the concentric tubes approach: A neurosurgical example · ICRA 2011
Medical and health informatics
surgical robotics
0.112011
Algorithms for design of continuum robots using the concentric tubes approach: A neurosurgical example · ICRA 2011

Methods — techniques the papers use, named apart from their topics

intracranial electrophysiology · 1.5dependency parsing · 1.5global pattern search · 0.2concentric tube kinematics · 0.2
YearPublicationVenuePosition
2024 Brain Treebank: Large-scale intracranial recordings from naturalistic language stimuli
abstract
We present the Brain Treebank, a large-scale dataset of electrophysiological neural responses, recorded from intracranial probes while 10 subjects watched one or more Hollywood movies. Subjects watched on average 2.6 Hollywood movies, for an average viewing time of 4.3 hours, and a total of 43 hours. The audio track for each movie was transcribed with manual corrections. Word onsets were manually annotated on spectrograms of the audio track for each movie. Each transcript was automatically parsed and manually corrected into the universal dependencies (UD) formalism, assigning a part of speech to every word and a dependency parse to every sentence. In total, subjects heard over 38,000 sentences (223,000 words), while they had on average 168 electrodes implanted. This is the largest dataset of intracranial recordings featuring grounded naturalistic language, one of the largest English UD treebanks in general, and one of only a few UD treebanks aligned to multimodal features. We hope that this dataset serves as a bridge between linguistic concepts, perception, and their neural representations. To that end, we present an analysis of which electrodes are sensitive to language features while also mapping out a rough time course of language processing across these electrodes. The Brain Treebank is available at https://BrainTreebank.dev/
Christopher Wang, Adam Uri Yaari, Aaditya Singh, Vighnesh Subramaniam, Dana Rosenfarb, Jan DeWitt, Pranav Misra, Joseph R. Madsen, Scellig S. Stone, Gabriel Kreiman, Boris Katz, Ignacio Cases, Andrei Barbu
NeurIPS8
2013 Detecting Epileptic Regions Based on Global Brain Connectivity Patterns
Andrew Sweet, Archana Venkataraman, Steven M. Stufflebeam, Hesheng Liu, Naoro Tanaka, Joseph R. Madsen, Polina Golland
MICCAI (1)6
2012 Robotic neuro-emdoscope with concentric tube augmentation
abstract
Surgical robots are gaining favor in part due to their capacity to reach remote locations within the body. Continuum robots are especially well suited for accessing deep spaces such as cerebral ventricles within the brain. Due to the entry point constraints and complicated structure, current techniques do not allow surgeons to access the full volume of the ventricles. The ability to access the ventricles with a dexterous robot would have significant clinical implications. This paper presents a concentric tube manipulator mated to a robotically controlled flexible endoscope. The device adds three degrees of freedom to the standard neuroendoscope and roboticizes the entire package allowing the operator to conveniently manipulate the device. To demonstrate the improved functionality, we use an in-silica virtual model as well as an ex-vivo anatomic model of a patient with a treatable form of hydrocephalus. In these experiments we demonstrate that the augmented and roboticized endoscope can efficiently reach critical regions that a manual scope cannot.
Evan J. Butler, Robert Hammond-Oakley, Szymon Chawarski, Andrew H. C. Gosline, Patrick J. Codd, Tomer Anor, Joseph R. Madsen, Pierre E. Dupont, Jesse Lock
IROS7
2011 Algorithms for design of continuum robots using the concentric tubes approach: A neurosurgical example
abstract
We propose a novel systematic approach to optimizing the design of concentric tube robots for neurosurgical procedures. These procedures require that the robot approach specified target sites while navigating and operating within an anatomically constrained work space. The availability of preoperative imaging makes our approach particularly suited for neurosurgery, and we illustrate the method with the example of endoscopic choroid plexus ablation. A novel parameterization of the robot characteristics is used in conjunction with a global pattern search optimization method. The formulation returns the design of the least-complex robot capable of reaching single or multiple target points in a confined space with constrained optimization metrics. A particular advantage of this approach is that it identifies the need for either fixed-curvature versus variable-curvature sections. We demonstrate the performance of the method in four clinically relevant examples.
Tomer Anor, Joseph R. Madsen, Pierre E. Dupont
ICRA2
2000 Task dependence of human theta: The case for multiple cognitive functions
Jeremy B. Caplan, Michael J. Kahana, Robert Sekuler, Matthew Kirschen, Joseph R. Madsen
Neurocomputing5