Demo Data from EDBT 2026 / reviewers in the wild / expert
Anna Hadarovich
dblp:272/8193
· DBLP profile ↗
2ranked-venue papers
2as first author
1since 2021 · last 2026
0000-0002-5139-4308ORCID · corroborated
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 2 · 2 first-author · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 3 heaviest of 3, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology
protein function prediction |
1.0 | 1 | 2026 | PICNIC web server for predicting proteins involved in biomolecular condensates · Bioinform. 2026 |
Bioinformatics and computational biology
protein structure prediction |
1.0 | 1 | 2026 | PICNIC web server for predicting proteins involved in biomolecular condensates · Bioinform. 2026 |
Bioinformatics and computational biology › protein structure analysis
structural feature extraction |
1.0 | 1 | 2026 | PICNIC web server for predicting proteins involved in biomolecular condensates · Bioinform. 2026 |
Methods — techniques the papers use, named apart from their topics
machine learning · 1.0gene ontology · 1.0alphafold2 · 1.0
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | PICNIC web server for predicting proteins involved in biomolecular condensatesabstractMOTIVATION: Biomolecular condensates have been implicated in key cellular processes such as gene regulation, stress response, and signaling, and dysregulation of condensates has been linked to neurodegeneration and other diseases. Computational algorithms that predict protein condensation can aid systematic characterization of biomolecular condensates at the proteome scale. However, many experimental labs may lack the computational background or resources to run sophisticated prediction tools locally. RESULTS: Here, we developed the web server implementation of the PICNIC (Proteins Involved in CoNdensates In Cells) machine learning algorithm. PICNIC uses sequence- and structure-based features derived from AlphaFold2 models to predict if a protein is involved in biomolecular condensates. In case of well-studied proteins with available annotations, the user can further benefit from an extended model, PICNIC-GO, which includes additional features based on Gene Ontology terms. Benchmark tests show that PICNIC algorithms predict condensate forming proteins with ∼80% accuracy. By providing an easy-to-use web server, researchers, without specialized expertise, can rapidly test hypotheses about any protein of interest, including designed and mutated sequences. AVAILABILITY AND IMPLEMENTATION: The PICNIC webserver is available at https://picnic-bio.org/. Anna Hadarovich, Maxim Scheremetjew, Hari Raj Singh, HongKee Moon, Lena Hersemann, Ágnes Tóth-Petróczy |
Bioinform. | 1 |
| 2020 | Deep Learning Approach with Rotate-Shift Invariant Input to Predict Protein Homodimer Structure
Anna Hadarovich, Alexander Kalinouski, Alexander V. Tuzikov |
ISBRA | 1 |