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Sifan Ye

dblp:281/7605 · DBLP profile ↗
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2ranked-venue papers
2as first author
2since 2021 · last 2022
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 first-author · 1 since 2021Human-computer interaction and ubiquitous computing · 1 · 1 first-author · 1 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Computer graphics and multimedia
1 paper
Visual content generation and editing · 50% Computer animation and physical simulation · 50%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 77% Computational science and engineering · 23%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › microbiology
virology
0.612022
An atlas of human viruses provides new insights into diversity and tissue tropism of human viruses · Bioinform. 2022
Computer animation and physical simulation
human-scene interaction
0.612022
Scene Synthesis from Human Motion · SIGGRAPH Asia 2022
Visual content generation and editing
scene synthesis
0.612022
Scene Synthesis from Human Motion · SIGGRAPH Asia 2022
Computational science and engineering › scientific data management
database curation
0.212022
An atlas of human viruses provides new insights into diversity and tissue tropism of human viruses · Bioinform. 2022

Methods — techniques the papers use, named apart from their topics

random forest · 0.6physical plausibility optimization · 0.6contact prediction · 0.6
YearPublicationVenuePosition
2022 Scene Synthesis from Human Motion
abstract
Large-scale capture of human motion with diverse, complex scenes, while immensely useful, is often considered prohibitively costly. Meanwhile, human motion alone contains rich information about the scene they reside in and interact with. For example, a sitting human suggests the existence of a chair, and their leg position further implies the chair’s pose. In this paper, we propose to synthesize diverse, semantically reasonable, and physically plausible scenes based on human motion. Our framework, Scene Synthesis from HUMan MotiON (SUMMON), includes two steps. It first uses ContactFormer, our newly introduced contact predictor, to obtain temporally consistent contact labels from human motion. Based on these predictions, SUMMON then chooses interacting objects and optimizes physical plausibility losses; it further populates the scene with objects that do not interact with humans. Experimental results demonstrate that SUMMON synthesizes feasible, plausible, and diverse scenes and has the potential to generate extensive human-scene interaction data for the community.
Sifan Ye, Yixing Wang, Jiaman Li, Dennis Park, C. Karen Liu, Huazhe Xu, Jiajun Wu 0001
SIGGRAPH Asia1
2022 An atlas of human viruses provides new insights into diversity and tissue tropism of human viruses
abstract
MOTIVATION: Viruses continue to threaten human health. Yet, the complete viral species carried by humans and their infection characteristics have not been fully revealed. RESULTS: This study curated an atlas of human viruses from public databases and literature, and built the Human Virus Database (HVD). The HVD contains 1131 virus species of 54 viral families which were more than twice the number of the human-infecting virus species reported in previous studies. These viruses were identified in human samples including 68 human tissues, the excreta and body fluid. The viral diversity in humans was age-dependent with a peak in the infant and a valley in the teenager. The tissue tropism of viruses was found to be associated with several factors including the viral group (DNA, RNA or reverse-transcribing viruses), enveloped or not, viral genome length and GC content, viral receptors and the virus-interacting proteins. Finally, the tissue tropism of DNA viruses was predicted using a random-forest algorithm with a middle performance. Overall, the study not only provides a valuable resource for further studies of human viruses but also deepens our understanding toward the diversity and tissue tropism of human viruses. AVAILABILITY AND IMPLEMENTATION: The HVD is available at http://computationalbiology.cn/humanVirusBase/#/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Sifan Ye, Congyu Lu, Ye Qiu, Heping Zheng, Xingyi Ge, Aiping Wu 0002, Zanxian Xia, Taijiao Jiang, Haizhen Zhu, Yousong Peng
Bioinform.1