Demo Data from EDBT 2026 / reviewers in the wild / expert
Farzana Kazi
dblp:30/8712
· DBLP profile ↗
2ranked-venue papers
0as first author
0since 2021 · last 2010
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 2
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
2 papers |
Bioinformatics and computational biology · 100% | |
| Computer graphics and multimedia
1 paper |
Visualization and visual analytics · 100% |
Topics — the 7 heaviest of 8, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › functional genomics
gene function prediction |
0.1 | 1 | 2010 | GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010 |
Bioinformatics and computational biology › functional genomics › gene function prediction
guilt-by-association |
0.1 | 1 | 2010 | GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010 |
Bioinformatics and computational biology › network bioinformatics › biological network analysis
network-based prediction |
0.1 | 1 | 2010 | GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010 |
Bioinformatics and computational biology › biological network
network biology |
0.1 | 1 | 2010 | Cytoscape Web: an interactive web-based network browser · Bioinform. 2010 |
Bioinformatics and computational biology › network bioinformatics › biological network analysis
network visualization |
0.1 | 1 | 2010 | Cytoscape Web: an interactive web-based network browser · Bioinform. 2010 |
Bioinformatics and computational biology
functional genomics |
0.0 | 1 | 2010 | GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010 |
Visualization and visual analytics
interactive visualization |
0.0 | 1 | 2010 | Cytoscape Web: an interactive web-based network browser · Bioinform. 2010 |
Methods — techniques the papers use, named apart from their topics
web-based visualization · 0.2network integration · 0.1guilt-by-association · 0.1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2010 | Cytoscape Web: an interactive web-based network browserabstractAbstract Summary: Cytoscape Web is a web-based network visualization tool–modeled after Cytoscape–which is open source, interactive, customizable and easily integrated into web sites. Multiple file exchange formats can be used to load data into Cytoscape Web, including GraphML, XGMML and SIF. Availability and Implementation: Cytoscape Web is implemented in Flex/ActionScript with a JavaScript API and is freely available at http://cytoscapeweb.cytoscape.org/ Contact: [email protected] Supplementary information: Supplementary data are available at Bioinformatics online. Christian Tannus Lopes, Max Franz, Farzana Kazi, Sylva L. Donaldson, Quaid Morris, Gary D. Bader |
Bioinform. | 3 |
| 2010 | GeneMANIA Cytoscape plugin: fast gene function predictions on the desktopabstractUNLABELLED: The GeneMANIA Cytoscape plugin brings fast gene function prediction capabilities to the desktop. GeneMANIA identifies the most related genes to a query gene set using a guilt-by-association approach. The plugin uses over 800 networks from six organisms and each related gene is traceable to the source network used to make the prediction. Users may add their own interaction networks and expression profile data to complement or override the default data. AVAILABILITY AND IMPLEMENTATION: The GeneMANIA Cytoscape plugin is implemented in Java and is freely available at http://www.genemania.org/plugin/. Jason Montojo, Khalid Zuberi, Harold Rodriguez, Farzana Kazi, Sylva L. Donaldson, Quaid Morris, Gary D. Bader |
Bioinform. | 4 |