Rachel Wong

dblp:322/5250 · DBLP profile ↗
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8ranked-venue papers
1as first author
8since 2021 · last 2023
0000-0003-3108-7324ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 7 · 1 first-author · 7 since 2021Artificial intelligence and machine learning · 1 · 1 since 2021
YearPublicationVenuePosition
2023 An integrated LSTM-HeteroRGNN model for interpretable opioid overdose risk prediction
Rachel Wong, Weimin Lyu, Kayley Abell-Hart, Jianyuan Deng, Janos G. Hajagos, Richard N. Rosenthal, Chao Chen 0012, Fusheng Wang 0001
Artif. Intell. Medicine2
2023 Characterizing terminology applied by authors and database producers to informatics literature on consumer engagement with wearable devices
abstract
OBJECTIVE: Identifying consumer health informatics (CHI) literature is challenging. To recommend strategies to improve discoverability, we aimed to characterize controlled vocabulary and author terminology applied to a subset of CHI literature on wearable technologies. MATERIALS AND METHODS: To retrieve articles from PubMed that addressed patient/consumer engagement with wearables, we developed a search strategy of textwords and Medical Subject Headings (MeSH). To refine our methodology, we used a random sample of 200 articles from 2016 to 2018. A descriptive analysis of articles (N = 2522) from 2019 identified 308 (12.2%) CHI-related articles, for which we characterized their assigned terminology. We visualized the 100 most frequent terms assigned to the articles from MeSH, author keywords, CINAHL, and Engineering Databases (Compendex and Inspec together). We assessed the overlap of CHI terms among sources and evaluated terms related to consumer engagement. RESULTS: The 308 articles were published in 181 journals, more in health journals (82%) than informatics (11%). Only 44% were indexed with the MeSH term "wearable electronic devices." Author keywords were common (91%) but rarely represented consumer engagement with device data, eg, self-monitoring (n = 12, 0.7%) or self-management (n = 9, 0.5%). Only 10 articles (3%) had terminology from all sources (authors, PubMed, CINAHL, Compendex, and Inspec). DISCUSSION: Our main finding was that consumer engagement was not well represented in health and engineering database thesauri. CONCLUSIONS: Authors of CHI studies should indicate consumer/patient engagement and the specific technology investigated in titles, abstracts, and author keywords to facilitate discovery by readers and expand vocabularies and indexing.
Kristine M. Alpi, Christie L. Martin, Joseph M. Plasek, Scott M. Sittig, Catherine Arnott Smith, Elizabeth Weinfurter, Jennifer K. Wells, Rachel Wong, Robin Austin
J. Am. Medical Informatics Assoc.8
2023 Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs
abstract
OBJECTIVE: Clinical encounter data are heterogeneous and vary greatly from institution to institution. These problems of variance affect interpretability and usability of clinical encounter data for analysis. These problems are magnified when multisite electronic health record (EHR) data are networked together. This article presents a novel, generalizable method for resolving encounter heterogeneity for analysis by combining related atomic encounters into composite "macrovisits." MATERIALS AND METHODS: Encounters were composed of data from 75 partner sites harmonized to a common data model as part of the NIH Researching COVID to Enhance Recovery Initiative, a project of the National Covid Cohort Collaborative. Summary statistics were computed for overall and site-level data to assess issues and identify modifications. Two algorithms were developed to refine atomic encounters into cleaner, analyzable longitudinal clinical visits. RESULTS: Atomic inpatient encounters data were found to be widely disparate between sites in terms of length-of-stay (LOS) and numbers of OMOP CDM measurements per encounter. After aggregating encounters to macrovisits, LOS and measurement variance decreased. A subsequent algorithm to identify hospitalized macrovisits further reduced data variability. DISCUSSION: Encounters are a complex and heterogeneous component of EHR data and native data issues are not addressed by existing methods. These types of complex and poorly studied issues contribute to the difficulty of deriving value from EHR data, and these types of foundational, large-scale explorations, and developments are necessary to realize the full potential of modern real-world data. CONCLUSION: This article presents method developments to manipulate and resolve EHR encounter data issues in a generalizable way as a foundation for future research and analysis.
Peter Leese, Adit Anand, Andrew T. Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, Janos G. Hajagos, Emily R. Pfaff, Richard A. Moffitt
J. Am. Medical Informatics Assoc.7
2023 A method for comparing multiple imputation techniques: A case study on the U.S. national COVID cohort collaborative
abstract
Healthcare datasets obtained from Electronic Health Records have proven to be extremely useful for assessing associations between patients' predictors and outcomes of interest. However, these datasets often suffer from missing values in a high proportion of cases, whose removal may introduce severe bias. Several multiple imputation algorithms have been proposed to attempt to recover the missing information under an assumed missingness mechanism. Each algorithm presents strengths and weaknesses, and there is currently no consensus on which multiple imputation algorithm works best in a given scenario. Furthermore, the selection of each algorithm's parameters and data-related modeling choices are also both crucial and challenging. In this paper we propose a novel framework to numerically evaluate strategies for handling missing data in the context of statistical analysis, with a particular focus on multiple imputation techniques. We demonstrate the feasibility of our approach on a large cohort of type-2 diabetes patients provided by the National COVID Cohort Collaborative (N3C) Enclave, where we explored the influence of various patient characteristics on outcomes related to COVID-19. Our analysis included classic multiple imputation techniques as well as simple complete-case Inverse Probability Weighted models. Extensive experiments show that our approach can effectively highlight the most promising and performant missing-data handling strategy for our case study. Moreover, our methodology allowed a better understanding of the behavior of the different models and of how it changed as we modified their parameters. Our method is general and can be applied to different research fields and on datasets containing heterogeneous types.
Elena Casiraghi, Rachel Wong, Margaret Hall, Ben D. Coleman, Marco Notaro, Michael D. Evans, Jena S. Tronieri, Hannah Blau, Bryan Laraway, Tiffany Callahan, Lauren E. Chan, Carolyn T. Bramante, John B. Buse, Richard A. Moffitt, Til Sturmer, Steven G. Johnson, Yu Raymond Shao, Justin T. Reese, Peter N. Robinson, Alberto Paccanaro, Giorgio Valentini, Jared D. Huling, Kenneth Wilkins
J. Biomed. Informatics2
2022 A Multimodal Transformer: Fusing Clinical Notes with Structured EHR Data for Interpretable In-Hospital Mortality Prediction
Weimin Lyu, Rachel Wong, Songzhu Zheng, Kayley Abell-Hart, Fushen Wang, Chao Chen 0012
AMIA3
2021 Integrating Gaming into Virtual Medication Reconciliation Education
Veena Lingam, Chao-Wei Tsai, Jacob T. Wooldridge, Rachel Wong
AMIA5
2021 Informatics to Power Post-COVID Care: A Framework for Patient Care and Secondary Data Use
Sritha Rajupet, Rachel Wong, Donna Moller, Lisa Maldonado, Tricia Weiss, Tahsin M. Kurç, Janos G. Hajagos, Hasit Shah, Mary M. Saltz, Joel H. Saltz, Veena Lingam
AMIA2
2021 Implementing Real-Time Prescription Benefit Tools: Early Experiences at 5 Academic Centers
Rachel Wong, Tanvi Mehta, Jeremy Schwartz, Jeremy A. Epstein, Erika Smith, Nitu Kashyup, Fasika Woreta, Bradley Crotty, Kristian Feterik, Michael Fliotsos
AMIA1