EDBT 2026 Demo / reviewers in the wild / expert
Matthew A Cleveland
dblp:370/5953
· DBLP profile ↗
1ranked-venue papers
0as first author
1since 2021 · last 2023
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 3 heaviest of 3, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › metagenomics
functional profiling |
0.7 | 1 | 2023 | KOunt: a reproducible KEGG orthologue abundance workflow · Bioinform. 2023 |
Bioinformatics and computational biology
metagenomics |
0.7 | 1 | 2023 | KOunt: a reproducible KEGG orthologue abundance workflow · Bioinform. 2023 |
Bioinformatics and computational biology › genome annotation
gene prediction |
0.2 | 1 | 2023 | KOunt: a reproducible KEGG orthologue abundance workflow · Bioinform. 2023 |
Methods — techniques the papers use, named apart from their topics
snakemake pipeline · 0.7
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2023 | KOunt: a reproducible KEGG orthologue abundance workflowabstractSUMMARY: Accurate gene prediction is essential for successful metagenome analysis. We present KOunt, a Snakemake pipeline, that precisely quantifies KEGG orthologue abundance. AVAILABILITY AND IMPLEMENTATION: KOunt is available on GitHub: https://github.com/WatsonLab/KOunt. The KOunt reference database is available on figshare: https://doi.org/10.6084/m9.figshare.21269715. Test data are available at https://doi.org/10.6084/m9.figshare.22250152 and version 1.2.0 of KOunt at https://doi.org/10.6084/m9.figshare.23607834. Jennifer Mattock, Marina Martínez-Álvaro, Matthew A Cleveland, Rainer Roehe, Mick Watson |
Bioinform. | 3 |