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Ondrej Olsak

dblp:373/0293 · DBLP profile ↗
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3ranked-venue papers
3as first author
3since 2021 · last 2025
0000-0002-9098-962XORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Systems, architecture and hardware · 2 · 2 first-author · 2 since 2021Software engineering, systems software and programming languages · 1 · 1 first-author · 1 since 2021Databases, data management, data science and information retrieval · 1 · 1 first-author · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Theoretical computer science
1 paper
Algorithms and data structures · 100%
Computer architecture, parallel and distributed computing, and storage systems
1 paper
High-performance computing · 100%
Computer graphics and multimedia
1 paper
Image and video processing · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
High-performance computing
scientific computing
0.812024
Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations · HPDC 2024
Algorithms and data structures
fourier transform
0.812024
Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations · HPDC 2024
Algorithms and data structures › signal processing algorithms
sparse fourier transform
0.812024
Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations · HPDC 2024
Image and video processing › image filtering
frequency-domain filtering
0.212024
Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations · HPDC 2024

Methods — techniques the papers use, named apart from their topics

spectral filtering · 2.3sparse fourier transform · 2.3FFT · 2.3
YearPublicationVenuePosition
2025 KuBench: A Kubernetes-Based Environment for Standardized REST API Framework Performance Evaluation
Ondrej Olsak, Matej Sauer, Marta Jaros, Jirí Jaros
ICWE1
2024 Accelerating Ultrasound Wave Propagation Simulations using Pruned FFT
abstract
The use of ultrasound in non-invasive medical procedures is a rapidly expanding area of medicine. The success of these treatments often depends on complex ultrasound simulations that require significant computing power, time, and associated calculation costs. To solve the differential equations associated with these simulations, the pseudo-spectral method with Fourier basis functions is employed. Thus, a significant part of the simulation time is spent computing the Fast Fourier Transform. This paper presents an approach that has the potential to reduce computation time and, consequently, the calculation costs of ultrasound wave propagation simulations used in the pre-planning phase of non-invasive treatments by involving the pruned Fast Fourier Transform algorithm (pruned FFT). The paper employs spectrum filtration using a binary map to emulate the behaviour of the pruned FFT. This allows for the evaluation of the impact of the pruned FFT on the number of computed elements in the spectral domain and the accuracy of the simulation. Results on real data have shown that it is possible to replace the Fast Fourier Transform (FFT) applied to acoustic pressure and velocity with the pruned version of the algorithm while obtaining results that are suitable for pre-planning purposes, thereby reducing computation time of the treatment planning. Involving the pruned FFT can also enable the execution of simulations in higher resolution domains with much faster execution times. In some cases, we were able to achieve around 90% accuracy on the single edge of the 2D domain.
Ondrej Olsak, Jirí Jaros
HPCC1
2024 Techniques for Efficient Fourier Transform Computation in Ultrasound Simulations
abstract
Noninvasive ultrasound surgeries represent a rapidly growing field in medical applications. Preoperative planning often relies on computationally expensive ultrasound simulations. This paper explores methods to accelerate these simulations by reducing the computation time of the Fourier transform, which is an integral part of the simulation in the k-Wave toolbox. Two experiments and their results will be presented. The first investigates substituting the standard Fast Fourier Transform (FFT) with a Sparse Fourier Transform (SFT). The second approach utilises filtering of the frequency spectrum, inspired by image compression algorithms. The aim of both experiments is to find a suitable method for accelerating the Fourier transform while utilising the sparsity of the spectrum in acoustic pressure. Our findings show that filtering offers significantly better results in terms of computation error, leading to a substantial reduction in overall simulation runtime.
Ondrej Olsak, Jirí Jaros
HPDC1