Demo Data from EDBT 2026 / reviewers in the wild / expert
Francis C. S. Brown
dblp:38/861
· DBLP profile ↗
1ranked-venue papers
0as first author
0since 2021 · last 2006
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology
gene expression analysis |
0.1 | 1 | 2006 | Unbiased pattern detection in microarray data series · Bioinform. 2006 |
Bioinformatics and computational biology › gene expression analysis › time-series gene expression analysis
time-course microarray analysis |
0.1 | 1 | 2006 | Unbiased pattern detection in microarray data series · Bioinform. 2006 |
Methods — techniques the papers use, named apart from their topics
kolmogorov complexity · 0.1compression-based pattern detection · 0.1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2006 | Unbiased pattern detection in microarray data seriesabstractMOTIVATION: Following the advent of microarray technology in recent years, the challenge for biologists is to identify genes of interest from the thousands of genetic expression levels measured in each microarray experiment. In many cases the aim is to identify pattern in the data series generated by successive microarray measurements. RESULTS: Here we introduce a new method of detecting pattern in microarray data series which is independent of the nature of this pattern. Our approach provides a measure of the algorithmic compressibility of each data series. A series which is significantly compressible is much more likely to result from simple underlying mechanisms than series which are incompressible. Accordingly, the gene associated with a compressible series is more likely to be biologically significant. We test our method on microarray time series of yeast cell cycle and show that it blindly selects genes exhibiting the expected cyclic behaviour as well as detecting other forms of pattern. Our results successfully predict two independent non-microarray experimental studies. Sebastian E. Ahnert, Karen Willbrand, Francis C. S. Brown, Thomas M. A. Fink |
Bioinform. | 3 |