Demo Data from EDBT 2026 / reviewers in the wild / expert
Zaniar Ghazizadeh
dblp:396/5975
· DBLP profile ↗
1ranked-venue papers
0as first author
1since 2021 · last 2024
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Artificial intelligence and machine learning · 1 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Medical and health informatics · 100% | |
| Databases, data mining, and information retrieval
1 paper |
Data integration and cleaning · 100% | |
| Artificial intelligence
1 paper |
Knowledge representation and reasoning · 100% |
Topics — the 2 heaviest of 3, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Data integration and cleaning
data curation |
0.8 | 1 | 2024 | UniTox: Leveraging LLMs to Curate a Unified Dataset of Drug-Induced Toxicity from FDA Labels · NeurIPS 2024 |
Knowledge, reasoning and agents › Knowledge representation and reasoning › knowledge acquisition › knowledge extraction
LLM-based information extraction |
0.2 | 1 | 2024 | UniTox: Leveraging LLMs to Curate a Unified Dataset of Drug-Induced Toxicity from FDA Labels · NeurIPS 2024 |
Methods — techniques the papers use, named apart from their topics
machine learning models · 2.3GPT-4o · 2.3
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2024 | UniTox: Leveraging LLMs to Curate a Unified Dataset of Drug-Induced Toxicity from FDA LabelsabstractDrug-induced toxicity is one of the leading reasons new drugs fail clinical trials. Machine learning models that predict drug toxicity from molecular structure could help researchers prioritize less toxic drug candidates. However, current toxicity datasets are typically small and limited to a single organ system (e.g., cardio, renal, or liver). Creating these datasets often involved time-intensive expert curation by parsing drug labelling documents that can exceed 100 pages per drug. Here, we introduce UniTox, a unified dataset of 2,418 FDA-approved drugs with drug-induced toxicity summaries and ratings created by using GPT-4o to process FDA drug labels. UniTox spans eight types of toxicity: cardiotoxicity, liver toxicity, renal toxicity, pulmonary toxicity, hematological toxicity, dermatological toxicity, ototoxicity, and infertility. This is, to the best of our knowledge, the largest such systematic human in vivo database by number of drugs and toxicities, and the first covering nearly all non-combination FDA-approved medications for several of these toxicities. We recruited clinicians to validate a random sample of our GPT-4o annotated toxicities, and UniTox's toxicity ratings concord with clinician labelers 85-96\% of the time. Finally, we benchmark several machine learning models trained on UniTox to demonstrate the utility of this dataset for building molecular toxicity prediction models. Jacob Silberg, Kyle Swanson, Elana Simon, Angela Zhang, Zaniar Ghazizadeh, Scott Ogden, Hisham Hamadeh, James Zou 0001 |
NeurIPS | 5 |