Demo Data from EDBT 2026 / reviewers in the wild / expert
Roman Klypa
dblp:401/0291
· DBLP profile ↗
1ranked-venue papers
1as first author
1since 2021 · last 2025
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Artificial intelligence and machine learning · 1 · 1 first-author · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Artificial intelligence
1 paper |
Generative modeling · 100% | |
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Machine learning › Generative modeling › diffusion model
conditional generation |
0.9 | 1 | 2025 | BAnG: Bidirectional Anchored Generation for Conditional RNA Design · ICML 2025 |
Bioinformatics and computational biology › RNA biology › RNA analysis › RNA bioinformatics
RNA design |
0.9 | 1 | 2025 | BAnG: Bidirectional Anchored Generation for Conditional RNA Design · ICML 2025 |
Methods — techniques the papers use, named apart from their topics
deep learning · 1.7bidirectional anchored generation · 1.7
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2025 | BAnG: Bidirectional Anchored Generation for Conditional RNA DesignabstractDesigning RNA molecules that interact with specific proteins is a critical challenge in experimental and computational biology. Existing computational approaches require a substantial amount of experimentally determined RNA sequences for each specific protein or a detailed knowledge of RNA structure, restricting their utility in practice. To address this limitation, we develop RNA-BAnG, a deep learning-based model designed to generate RNA sequences for protein interactions without these requirements. Central to our approach is a novel generative method, Bidirectional Anchored Generation (BAnG), which leverages the observation that protein-binding RNA sequences often contain functional binding motifs embedded within broader sequence contexts. We first validate our method on generic synthetic tasks involving similar localized motifs to those appearing in RNAs, demonstrating its benefits over existing generative approaches. We then evaluate our model on biological sequences, showing its effectiveness for conditional RNA sequence design given a binding protein. Roman Klypa, Alberto Bietti, Sergei Grudinin |
ICML | 1 |