Recovering point clouds involves the sequential process of sampling and restoration, yet existing methods struggle to effectively leverage both topological and geometric attributes. To address this, we propose an end-to-end architecture named TopGeoFormer, which maintains these critical properties throughout the sampling and restoration phases. First, we revisit traditional feature extraction techniques to yield topological embedding using a continuous mapping of relative relationships between neighboring points, and integrate it in both phases for preserving the structure of the original space. Second, we propose the InterTwining Attention to fully merge topological and geometric embeddings, which queries shape with local awareness in both phases to form a learnable 3D shape context facilitated with point-wise, point-shape-wise, and intra-shape features. Third, we introduce a full geometry loss and a topological constraint loss to optimize the embeddings in both Euclidean and topological spaces. The geometry loss uses inconsistent matching between coarse-to-fine generations and targets for reconstructing better geometric details, and the constraint loss limits embedding variances for better approximation of the topological space. In experiments, we comprehensively analyze the circumstances using the conventional and learning-based sampling/upsampling/recovery algorithms. The quantitative and qualitative results demonstrate that our method significantly outperforms existing sampling and recovery methods.