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Demo Data from EDBT 2026 / reviewers in the wild / expert

Vassilis Pachnis

dblp:426/6029 · DBLP profile ↗
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1ranked-venue papers
0as first author
1since 2021 · last 2026
—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
single-cell analysis		 1.012026
Capturing gene-cell duality in a cat's cradle · Bioinform. 2026
Bioinformatics and computational biology › single-cell analysis
cell clustering		 0.312026
Capturing gene-cell duality in a cat's cradle · Bioinform. 2026
Bioinformatics and computational biology › gene expression analysis
gene clustering		 0.312026
Capturing gene-cell duality in a cat's cradle · Bioinform. 2026
YearPublicationVenuePosition
2026 Capturing gene-cell duality in a cat's cradle
abstract
SUMMARY: CatsCradle is an R package for single-cell analysis that exploits the duality between cells and the genes they express. Our package provides tools to cluster genes, visualize relationships between them, and to explore relationships between gene clusters (programmes) and cell clusters (cell types). AVAILABILITY AND IMPLEMENTATION: CatsCradle is available freely as an R Bioconductor package (https://bioconductor.org/packages/CatsCradle) and interfaces directly with Seurat (Hao et al. 2024) and SingleCellExperiment (Amezquita et al. 2020) data structures.
Anna Laddach, Fränze Progatzky, Vassilis Pachnis, Michael Shapiro 0002
 Bioinform.3