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Timothy V. Pyrkov

dblp:44/7068 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2009
—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › structural bioinformatics
protein-ligand interaction analysis
0.112009
PLATINUM: a web tool for analysis of hydrophobic/hydrophilic organization of biomolecular complexes · Bioinform. 2009
Bioinformatics and computational biology
structural bioinformatics
0.112009
PLATINUM: a web tool for analysis of hydrophobic/hydrophilic organization of biomolecular complexes · Bioinform. 2009
Bioinformatics and computational biology › molecular informatics › molecular modeling
molecular docking
0.012009
PLATINUM: a web tool for analysis of hydrophobic/hydrophilic organization of biomolecular complexes · Bioinform. 2009

Methods — techniques the papers use, named apart from their topics

molecular hydrophobicity potential · 0.1
YearPublicationVenuePosition
2009 PLATINUM: a web tool for analysis of hydrophobic/hydrophilic organization of biomolecular complexes
abstract
UNLABELLED: The PLATINUM (Protein-Ligand ATtractions Investigation NUMerically) web service is designed for analysis and visualization of hydrophobic/hydrophilic properties of biomolecules supplied as 3D-structures. Furthermore, PLATINUM provides a number of tools for quantitative characterization of the hydrophobic/hydrophilic match in biomolecular complexes e.g. in docking poses. These complement standard scoring functions. The calculations are based on the concept of empirical Molecular Hydrophobicity Potential (MHP). AVAILABILITY: The PLATINUM web tool as well as detailed documentation and tutorial are available free of charge for academic users at http://model.nmr.ru/platinum/. PLATINUM requires Java 5 or higher and Adobe Flash Player 9. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Timothy V. Pyrkov, Anton O. Chugunov, Nikolay A. Krylov, Dmitry E. Nolde, Roman G. Efremov
Bioinform.1