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Rone Kwei Lim

dblp:44/9984 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2011
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 50% Computational science and engineering · 50%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › systems biology › biochemical simulation
biochemical system simulation		 0.112011
StochKit2: software for discrete stochastic simulation of biochemical systems with events · Bioinform. 2011
Computational science and engineering › numerical simulation
stochastic simulation algorithm		 0.112011
StochKit2: software for discrete stochastic simulation of biochemical systems with events · Bioinform. 2011

Methods — techniques the papers use, named apart from their topics

gillespie stochastic simulation algorithm · 0.1
YearPublicationVenuePosition
2011 StochKit2: software for discrete stochastic simulation of biochemical systems with events
abstract
SUMMARY: StochKit2 is the first major upgrade of the popular StochKit stochastic simulation software package. StochKit2 provides highly efficient implementations of several variants of Gillespie's stochastic simulation algorithm (SSA), and tau-leaping with automatic step size selection. StochKit2 features include automatic selection of the optimal SSA method based on model properties, event handling, and automatic parallelism on multicore architectures. The underlying structure of the code has been completely updated to provide a flexible framework for extending its functionality. AVAILABILITY: StochKit2 runs on Linux/Unix, Mac OS X and Windows. It is freely available under GPL version 3 and can be downloaded from http://sourceforge.net/projects/stochkit/. CONTACT: [email protected].
Kevin R. Sanft, Sheng Wu 0002, Min K. Roh, Jin Fu 0001, Rone Kwei Lim, Linda R. Petzold
 Bioinform.5