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David Shields

dblp:46/4571 · also David E. Shields · DBLP profile ↗
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20ranked-venue papers
0as first author
2since 2021 · last 2022
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 18 · 2 since 2021Systems, architecture and hardware · 1Software engineering, systems software and programming languages · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Software engineering, system software, and programming languages
2 papers
Software maintenance and evolution · 57% Compilers and program optimization · 43%
Computer architecture, parallel and distributed computing, and storage systems
1 paper
Parallel and multicore computing · 100%

Topics — the 5 heaviest of 5, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Software maintenance and evolution
software configuration management
0.012002
Supporting aggregation in fine grained software configuration management · SIGSOFT FSE 2002
Compilers and program optimization › parallel program optimization
communication optimization
0.011995
An HPF Compiler for the IBM SP2 · SC 1995
Compilers and program optimization
parallelizing compiler
0.011995
An HPF Compiler for the IBM SP2 · SC 1995
Parallel and multicore computing › parallel programming models
automatic parallelization
0.011995
An HPF Compiler for the IBM SP2 · SC 1995
Parallel and multicore computing
parallel programming models
0.011995
An HPF Compiler for the IBM SP2 · SC 1995

Methods — techniques the papers use, named apart from their topics

virtual source files · 0.0aspect-oriented software development · 0.0data availability analysis · 0.0collective communication · 0.0coarse-grain wavefronting · 0.0
YearPublicationVenuePosition
2022 Availability of Health Information Exchange Data for Children with Special Health Care Needs through a SMART on FHIR App
Elaine M. Fan, Teresa Taft, Damian Borbolla, Elizabeth Anne Rudd, Emerson P. Borsato, Ryan Cornia, Phillip B. Warner, David Shields, Pallavi Ranade-Kharkar, Kensaku Kawamoto, Carole H. Stipelman, Chuck Norlin, Jennifer Goldman-Luthy, Guilherme Del Fiol
AMIA8
2022 GARDE: a standards-based clinical decision support platform for identifying population health management cohorts
abstract
Population health management (PHM) is an important approach to promote wellness and deliver health care to targeted individuals who meet criteria for preventive measures or treatment. A critical component for any PHM program is a data analytics platform that can target those eligible individuals. OBJECTIVE: The aim of this study was to design and implement a scalable standards-based clinical decision support (CDS) approach to identify patient cohorts for PHM and maximize opportunities for multi-site dissemination. MATERIALS AND METHODS: An architecture was established to support bidirectional data exchanges between heterogeneous electronic health record (EHR) data sources, PHM systems, and CDS components. HL7 Fast Healthcare Interoperability Resources and CDS Hooks were used to facilitate interoperability and dissemination. The approach was validated by deploying the platform at multiple sites to identify patients who meet the criteria for genetic evaluation of familial cancer. RESULTS: The Genetic Cancer Risk Detector (GARDE) platform was created and is comprised of four components: (1) an open-source CDS Hooks server for computing patient eligibility for PHM cohorts, (2) an open-source Population Coordinator that processes GARDE requests and communicates results to a PHM system, (3) an EHR Patient Data Repository, and (4) EHR PHM Tools to manage patients and perform outreach functions. Site-specific deployments were performed on onsite virtual machines and cloud-based Amazon Web Services. DISCUSSION: GARDE's component architecture establishes generalizable standards-based methods for computing PHM cohorts. Replicating deployments using one of the established deployment methods requires minimal local customization. Most of the deployment effort was related to obtaining site-specific information technology governance approvals.
Richard L. Bradshaw, Kensaku Kawamoto, Kimberly A. Kaphingst, Wendy Kohlmann, Rachel Hess, Michael C. Flynn, Claude J. Nanjo, Phillip B. Warner, Jianlin Shi, Keaton L. Morgan, Kadyn Kimball, Pallavi Ranade-Kharkar, Ophira Ginsburg, Melody Goodman, Rachelle Chambers, Devin M. Mann, Scott P. Narus, Shane Loomis, Priscilla Chan, Rachel Monahan, Emerson P. Borsato, David Shields, Douglas K. Martin, Cecilia M. Kessler, Guilherme Del Fiol
J. Am. Medical Informatics Assoc.23
2020 Integrated displays to improve chronic disease management in ambulatory care: A SMART on FHIR application informed by mixed-methods user testing
abstract
OBJECTIVE: The study sought to evaluate a novel electronic health record (EHR) add-on application for chronic disease management that uses an integrated display to decrease user cognitive load, improve efficiency, and support clinical decision making. MATERIALS AND METHODS: We designed a chronic disease management application using the technology framework known as SMART on FHIR (Substitutable Medical Applications and Reusable Technologies on Fast Healthcare Interoperability Resources). We used mixed methods to obtain user feedback on a prototype to support ambulatory providers managing chronic obstructive pulmonary disease. Each participant managed 2 patient scenarios using the regular EHR with and without access to our prototype in block-randomized order. The primary outcome was the percentage of expert-recommended ideal care tasks completed. Timing, keyboard and mouse use, and participant surveys were also collected. User experiences were captured using a retrospective think-aloud interview analyzed by concept coding. RESULTS: With our prototype, the 13 participants completed more recommended care (81% vs 48%; P < .001) and recommended tasks per minute (0.8 vs 0.6; P = .03) over longer sessions (7.0 minutes vs 5.4 minutes; P = .006). Keystrokes per task were lower with the prototype (6 vs 18; P < .001). Qualitative themes elicited included the desire for reliable presentation of information which matches participants' mental models of disease and for intuitive navigation in order to decrease cognitive load. DISCUSSION: Participants completed more recommended care by taking more time when using our prototype. Interviews identified a tension between using the inefficient but familiar EHR vs learning to use our novel prototype. Concept coding of user feedback generated actionable insights. CONCLUSIONS: Mixed methods can support the design and evaluation of SMART on FHIR EHR add-on applications by enhancing understanding of the user experience.
Rebecca L. Curran, Polina V. Kukhareva, Teresa Taft, Charlene R. Weir, Thomas J. Reese, Claude J. Nanjo, Salvador Rodriguez-Loya, Douglas K. Martin, Phillip B. Warner, David Shields, Michael C. Flynn, Jonathan P. Boltax, Kensaku Kawamoto
J. Am. Medical Informatics Assoc.10
2019 Balancing Functionality versus Portability for SMART on FHIR Applications: Case Study for a Neonatal Bilirubin Management Application
Polina V. Kukhareva, Phillip B. Warner, Salvador Rodriguez-Loya, Heidi Kramer, Charlene R. Weir, Claude J. Nanjo, David Shields, Kensaku Kawamoto
AMIA7
2018 A Testing Framework to Validate SMART on FHIR Apps and CDS Hooks Services
Richard L. Bradshaw, Brent D. Hill, Damian Borbolla, Phillip B. Warner, Salvador Rodriguez-Loya, David Shields, Ryan Cornia, Guilherme Del Fiol, Kensaku Kawamoto
AMIA6
2017 Single-reviewer electronic phenotyping validation in operational settings: Comparison of strategies and recommendations
Polina V. Kukhareva, Catherine J. Staes, Kevin Noonan, Heather Mueller, Phillip B. Warner, David Shields, Howard Weeks, Kensaku Kawamoto
J. Biomed. Informatics6
2015 Errors with Manual Phenotype Validation: Case Study and Implications
Polina V. Kukhareva, Catherine J. Staes, Tyler J. Tippetts, Phillip B. Warner, David Shields, Heather Mueller, Kevin Noonan, Kensaku Kawamoto
AMIA5
2015 Design, Development, and Initial Evaluation of a Terminology for Clinical Decision Support and Electronic Clinical Quality Measurement
Yanhua Lin, Catherine J. Staes, David Shields, Vijayabhaskar R. Kandula, Brandon M. Welch, Kensaku Kawamoto
AMIA3
2015 The CDS Collaborative: Goals, Deliverables, and Future Directions
Salvador Rodriguez-Loya, Emory Fry, Tadesse Sefer, Phillip B. Warner, Claude J. Nanjo, Jerry Goodnough, David Shields, Steven Elliott, Esteban Aliverti, Kensaku Kawamoto
AMIA7
2015 Challenges and Solutions in Optimizing Execution Performance of a Clinical Decision Support-Based Quality Measurement (CDS-QM) Framework
Tyler J. Tippetts, Phillip B. Warner, Polina V. Kukhareva, David Shields, Catherine J. Staes, Kensaku Kawamoto
AMIA4
2014 Clinical Decision Support-based Quality Measurement (CDS-QM) Framework: Prototype Implementation, Evaluation, and Future Directions
Polina V. Kukhareva, Kensaku Kawamoto, David Shields, Darryl Barfuss, Anne Halley, Tyler J. Tippetts, Phillip B. Warner, Bruce E. Bray, Catherine J. Staes
AMIA3
2014 Identification of Common Concepts for Clinical Decision Support and Mapping to the Health Level 7 Virtual Medical Record Data Model
Yanhua Lin, Brandon M. Welch, Tyler J. Tippetts, Polina V. Kukhareva, David Shields, Catherine J. Staes, Vijayabhaskar R. Kandula, Bruce E. Bray, Kensaku Kawamoto
AMIA5
2014 Value Set Management to Enable Interoperable Clinical Decision Support: Development, Use, and Initial Evaluation of the OpenCDS Value Set Manager
Tyler J. Tippetts, Phillip B. Warner, David Shields, Salvador Rodriguez-Loya, Catherine J. Staes, Kensaku Kawamoto
AMIA3
2013 Health eDecisions (HeD): a Public-Private Partnership to Develop and Validate Standards to Enable Clinical Decision Support at Scale
Kensaku Kawamoto, Tonya Hongsermeier, Aziz A. Boxwala, Bryn Rhodes, Alicia A. Morton, Jamie Parker, Claude J. Nanjo, Victor C. Lee, Bernadette K. Minton, Davide Sottara, Howard R. Strasberg, Stephen Claypool, Julie A. Scherer, Matthew D. Pfeffer, David Shields, Keith W. Boone, Peter J. Haug, Thomson M. Kuhn, Merideth C. Vida, Anna Langhans, Cem Mangir, Erik Pupo, Robert F. Lario, David S. Shevlin, Jacob Reider
AMIA15
2012 Immunization Calculation Engine (ICE): an Open-Source, Multi-Jurisdictional, Standards-Based Immunization Decision Support System Leveraging the OpenCDS Platform
Daryl Chertcoff, David Shields, Regina Austin, Samuel Nicolary, Michael Suralik, Noam Arzt, Ruth Gubernick, Jean Kirupaharan, Vikki Papadouka, Sheila Palevsky, Elzbieta Kopec-Schrader, Kristen Forney, Deepali Rastogi, Harisankar Sivakumaran, Bonnie Davis
AMIA2
2012 Enabling Intuitive Knowledge Authoring Using Continuity of Care Documents: the OpenCDS CCD-vMR Project
Jason R. Jacobs, Catherine J. Staes, Kensaku Kawamoto, David Shields
AMIA4
2012 Clinical Information System Services and Capabilities Desired for Scalable, Standards-Based, Service-oriented Decision Support: Consensus Assessment of the Health Level 7 Clinical Decision Support Work Group
Kensaku Kawamoto, Jason R. Jacobs, Brandon M. Welch, Vojtech Huser, Marilyn D. Paterno, Guilherme Del Fiol, David Shields, Howard R. Strasberg, Peter J. Haug, Zhijing Liu, Robert A. Jenders, David Rowed, Daryl Chertcoff, Karsten Fehre, Klaus-Peter Adlassnig, Arthur Curtis
AMIA7
2012 OpenCDS ePHR: an Open-Source, Standards-Based Decision Support Platform for Electronic Public Health Reporting
Kensaku Kawamoto, David Shields, Jon Reid, Susan Mottice, Paul Sanders, Catherine J. Staes, Cheri Hunter, Bruce E. Bray
AMIA2
2002 Supporting aggregation in fine grained software configuration management
abstract
Fine-grained software configuration management offers substantial benefits for large-scale collaborative software development, enabling a variety of interesting and useful features including complexity management, support for aspect-oriented software development, and support for communication and coordination within software engineering teams, as described in [4]. However, fine granularity by itself is not sufficient to achieve these benefits. Most of the benefits of fine granularity result from the ability to combine fine-grained artifacts in various ways: supporting multiple overlapping organizations of program source by combining fine-grained artifacts into virtual source files (VSFs); supporting coordination by allowing developers to precisely mark the set of artifacts affected by a change; associating products from different phases of the development process; etc.In this paper, we describe how a general aggregation mechanism can be used to support the various functionality enabled by fine grained SCM. We present a set of requirements that an aggregation facility must provide in order to yield these benefits, and we provide a description of the implementation of such an aggregation system in our experimental SCM system.
Mark Chu-Carroll, James L. Wright, David Shields
SIGSOFT FSE3
1995 An HPF Compiler for the IBM SP2
abstract
We describe pHPF, an research prototype HPF compiler for the IBM SP series parallel machines. The compiler accepts as input Fortran 90 and Fortran 77 programs, augmented with HPF directives; sequential loops are automatically parallelized. The compiler supports symbolic analysis of expressions. This allows parameters such as the number of processors to be unknown at compile-time without significantly affecting performance. Communication schedules and computation guards are generated in a parameterized form at compile-time. Several novel optimizations and improved versions of well-known optimizations have been implemented in pHPF to exploit parallelism and reduce communication costs. These optimizations include elimination of redundant communication using data-availability analysis; using collective communication; new techniques for mapping scalar variables; coarse-grain wavefronting; and communication reduction in multi-dimensional shift communications. We present experimenta...
Manish Gupta 0002, Samuel P. Midkiff, Edith Schonberg, Ven Seshadri, David Shields, Ko-Yang Wang, Wai-Mee Ching, Ton Anh Ngo
SC5