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Christiaan Karreman

dblp:48/1602 · DBLP profile ↗
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2ranked-venue papers
2as first author
0since 2021 · last 2002
0000-0002-7790-9891ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 2 · 2 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › bioinformatics infrastructure
sequence analysis software		 0.012002
AiO, combining DNA/protein programs and oligo-management · Bioinform. 2002
Bioinformatics and computational biology › sequence analysis › sequence comparison
dot plot sequence comparison		 0.011992
A dotplot program for the Atari ST, for the analysis of DNA and protein sequences · Comput. Appl. Biosci. 1992
Bioinformatics and computational biology
sequence analysis		 0.011992
A dotplot program for the Atari ST, for the analysis of DNA and protein sequences · Comput. Appl. Biosci. 1992

Methods — techniques the papers use, named apart from their topics

graphical user interface · 0.0dotplot visualization · 0.0
YearPublicationVenuePosition
2002 AiO, combining DNA/protein programs and oligo-management
abstract
UNLABELLED: AiO (All in One) is a program for Windows, that combines typical DNA/protein features such as plasmid map drawing, finding of ORFs, translate, backtranslate and high quality printing with a number of databases. These databases allow the management of oligonucleotides, oligonucleotide-manufacturers, restriction enzymes, structural DNA and program users in a multi-user/multi-group environment. AVAILABILITY: An AiO specific website, with the possibility to download is at: http://134.99.88.55/aio/ SUPPLEMENTARY INFORMATION: Examples with screen shots- http://134.99.88.55/aio/ : Manual (in PDF format)-http://134.99.88.55/aio/manual.pdf
Christiaan Karreman
 Bioinform.1
1992 A dotplot program for the Atari ST, for the analysis of DNA and protein sequences
abstract
A program was written in GFA-BASIC for the Atari ST microcomputer aimed at drawing two-dimensional homology 'dotplot' patterns for two protein or DNA sequences. The program, built around a machine-code subroutine, communicates interactively with the user by means of a multi-button dialogue panel and mouse-directed input. A 1000 X 1000 sequence comparison with a 14:21 stringency window takes 12 s.
Christiaan Karreman
 Comput. Appl. Biosci.1