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Demet Sirim

dblp:50/1756 · DBLP profile ↗
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2ranked-venue papers
0as first author
0since 2021 · last 2017
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 1Human-computer interaction and ubiquitous computing · 1Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Human-computer interaction and pervasive computing
1 paper
Immersive interaction · 77% Usability and user experience research · 23%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Computer graphics and multimedia
1 paper
Visualization and visual analytics · 100%

Topics — the 5 heaviest of 7, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Usability and user experience research › safety-critical interaction
driver distraction
0.112017
3D-FRC: Depiction of the future road course in the Head-Up-Display · ISMAR 2017
Bioinformatics and computational biology
cytochrome p450
0.112007
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family · Bioinform. 2007
Bioinformatics and computational biology › biological database
protein family database
0.112007
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family · Bioinform. 2007
Bioinformatics and computational biology › protein structure analysis
protein sequence-structure analysis
0.112007
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family · Bioinform. 2007
Bioinformatics and computational biology › protein sequence analysis
sequence-function relationship
0.112007
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family · Bioinform. 2007

Methods — techniques the papers use, named apart from their topics

user study · 0.6eye tracking · 0.6phylogenetic analysis · 0.1multiple sequence alignment · 0.1hidden markov model · 0.1
YearPublicationVenuePosition
2017 3D-FRC: Depiction of the future road course in the Head-Up-Display
abstract
The introduction of Head-Up-Displays (HUDs) have opened up avenues for a whole range of novel AR applications. However, until these applications become available for the mass market a number of problems need to be tackled. For example, the field of view (FoV) of current HUDs is extremely limited, and real world tracking and 3D reconstruction are still not precise enough to show driving information embedded into wide areas of complex traffic environment. It is not possible to show true AR-visualizations in the display areas provided by the current FoVs. In this paper, we investigate how an AR-like visualization approach in current HUDs (with a limited FoV) can support drivers in foreseeing the future road course. This visualisation uses the already established concept of an electronic horizon. By complying with automotive standards, our application can be easily adapted for series production. With this visualisation we performed a user study, investigating the effect on drivers' gaze behaviour. For this reason the test subjects were equipped with an eye tracking system. The results showed a decrease in both, the number of gazes as well as total glance time on the head unit and the instrument cluster. We also investigated the test subjects' braking behaviour around sharp bends of the road which showed an overall improvement when the visualisation was enabled. Furthermore it showed an increase of the mean glance duration in the area of the HUD. Note that the eye tracking system is not capable of distinguishing between glances at the visualisation in the HUD and the users' glance at objects behind the visualisation - overlapping with the HUD. This would require tracking the test persons' depth of focus. The study showed that developers need to be concerned about not displaying excessively in the HUD, so as not to distract drivers. It furthermore showed that AR-like visualizations have the potential to decrease the time the driver is not looking at the road creating a safer driving experience.
Christian A. Wiesner, Mike Ruf, Demet Sirim, Gudrun Klinker
ISMAR3
2007 The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family
abstract
SUMMARY: The Cytochrome P450 Engineering Database (CYPED) has been designed to serve as a tool for a comprehensive and systematic comparison of protein sequences and structures within the vast and diverse family of cytochrome P450 monooxygenases (CYPs). The CYPED currently integrates sequence and structure data of 3911 and 25 proteins, respectively. Proteins are grouped into homologous families and superfamilies according to Nelson's classification. Nonclassified CYP sequences are assigned by similarity. Functionally relevant residues are annotated. The web accessible version contains multisequence alignments, phylogenetic trees and HMM profiles. The CYPED is regularly updated and supplies all data for download. Thus, it provides a valuable data source for phylogenetic analysis, investigation of sequence-function relationships and the design of CYPs with improved biochemical properties. ABBREVIATIONS: Cytochrome P450 Engineering Database, CYPED; cytochrome P450 monooxygenase, CYP; Hidden Markov Model, HMM. AVAILABILITY: www.cyped.uni-stuttgart.de
Markus Fischer 0002, Michael Knoll, Demet Sirim, Florian Wagner 0005, Sonja Funke, Jürgen Pleiss
Bioinform.3