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Marian Thomson

dblp:55/271 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2015
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
biological data visualization		 0.212015
poRe: an R package for the visualization and analysis of nanopore sequencing data · Bioinform. 2015
Bioinformatics and computational biology › sequence analysis
nanopore sequencing		 0.212015
poRe: an R package for the visualization and analysis of nanopore sequencing data · Bioinform. 2015
Bioinformatics and computational biology › sequence analysis
sequencing data analysis		 0.212015
poRe: an R package for the visualization and analysis of nanopore sequencing data · Bioinform. 2015
Bioinformatics and computational biology › biological data visualization
sequencing data visualization		 0.212015
poRe: an R package for the visualization and analysis of nanopore sequencing data · Bioinform. 2015
YearPublicationVenuePosition
2015 poRe: an R package for the visualization and analysis of nanopore sequencing data
abstract
MOTIVATION: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the bioinformatics community will need to design and build a suite of tools specifically for MinION data. RESULTS: Here we present poRe, a package for R that enables users to manipulate, organize, summarize and visualize MinION nanopore sequencing data. As a package for R, poRe has been tested on Windows, Linux and MacOSX. Crucially, the Windows version allows users to analyse MinION data on the Windows laptop attached to the device. AVAILABILITY AND IMPLEMENTATION: poRe is released as a package for R at http://sourceforge.net/projects/rpore/. A tutorial and further information are available at https://sourceforge.net/p/rpore/wiki/Home/.
Mick Watson, Marian Thomson, Judith E. Risse, Richard Talbot, Javier Santoyo, Karim Gharbi, Mark L. Blaxter
 Bioinform.2