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Jessica Monaghan

dblp:55/9429 · also Jessica J. M. Monaghan · DBLP profile ↗
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10ranked-venue papers
1as first author
7since 2021 · last 2024
0000-0003-1416-4164ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 4 · 1 first-author · 4 since 2021Graphics, computer vision, multimedia, augmented reality and games · 3 · 1 first-author · 1 since 2021Applied, interdisciplinary, general and emerging computing · 2 · 2 since 2021Systems, architecture and hardware · 1Databases, data management, data science and information retrieval · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 50% Medical and health informatics · 50%
Databases, data mining, and information retrieval
1 paper
Data mining · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Medical and health informatics
EEG analysis
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Bioinformatics and computational biology › neuroscience
neuroinformatics
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Data mining
clustering
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Data mining › clustering
semi-supervised clustering
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023

Methods — techniques the papers use, named apart from their topics

semi-supervised learning · 1.3multi-constraint optimization · 1.3graph embedding · 1.3
YearPublicationVenuePosition
2024 Automatic Detection of Hearing Loss from Children's Speech using wav2vec 2.0 Features
Jessica Monaghan, Arun Sebastian, Nicky Chong-White, Vicky Zhang, Vijayalakshmi Easwar, Pádraig Kitterick
INTERSPEECH1
2024 Deep Factor Learning for Accurate Brain Neuroimaging Data Analysis on Discrimination for Structural MRI and Functional MRI
abstract
Analysis of neuroimaging data (e.g., Magnetic Resonance Imaging, structural and functional MRI) plays an important role in monitoring brain dynamics and probing brain structures. Neuroimaging data are multi-featured and non-linear by nature, and it is a natural way to organise these data as tensors prior to performing automated analyses such as discrimination of neurological disorders like Parkinson's Disease (PD) and Attention Deficit and Hyperactivity Disorder (ADHD). However, the existing approaches are often subject to performance bottlenecks (e.g., conventional feature extraction and deep learning based feature construction), as these can lose the structural information that correlates multiple data dimensions or/and demands excessive empirical and application-specific settings. This study proposes a Deep Factor Learning model on a Hilbert Basis tensor (namely, HB-DFL) to automatically derive latent low-dimensional and concise factors of tensors. This is achieved through the application of multiple Convolutional Neural Networks (CNNs) in a non-linear manner along all possible dimensions with no assumed a priori knowledge. HB-DFL leverages the Hilbert basis tensor to enhance the stability of the solution by regularizing the core tensor to allow any component in a certain domain to interact with any component in the other dimensions. The final multi-domain features are handled through another multi-branch CNN to achieve reliable classification, exemplified here using MRI discrimination as a typical case. A case study of MRI discrimination has been performed on public MRI datasets for discrimination of PD and ADHD. Results indicate that 1) HB-DFL outperforms the counterparts in terms of FIT, mSIR and stability (mSC and umSC) of factor learning; 2) HB-DFL identifies PD and ADHD with an accuracy significantly higher than state-of-the-art methods do. Overall, HB-DFL has significant potentials for neuroimaging data analysis applications with its stability of automatic construction of structural features.
Hengjin Ke, Dan Chen 0001, Quanming Yao, Yunbo Tang, Jia Wu 0001, Jessica Monaghan, Paul F. Sowman, David McAlpine
IEEE Trans. Comput. Biol. Bioinform.6
2023 Functional connectivity learning via Siamese-based SPD matrix representation of brain imaging data
Yunbo Tang, Dan Chen 0001, Jia Wu 0001, Weiping Tu, Jessica Monaghan, Paul F. Sowman, David McAlpine
Neural Networks5
2023 Corrigendum to "Functional Connectivity Learning via Siamese-based SPD Matrix Representation of Brain Imaging Data" [Neural Networks 163 (2023) 272-285]
Yunbo Tang, Dan Chen 0001, Jia Wu 0001, Weiping Tu, Jessica Monaghan, Paul F. Sowman, David McAlpine
Neural Networks5
2023 Disentangled and Side-Aware Unsupervised Domain Adaptation for Cross-Dataset Subjective Tinnitus Diagnosis
abstract
EEG-based tinnitus classification is a valuable tool for tinnitus diagnosis, research, and treatments. Most current works are limited to a single dataset where data patterns are similar. But EEG signals are highly non-stationary, resulting in model's poor generalization to new users, sessions or datasets. Thus, designing a model that can generalize to new datasets is beneficial and indispensable. To mitigate distribution discrepancy across datasets, we propose to achieve Disentangled and Side-aware Unsupervised Domain Adaptation (DSUDA) for cross-dataset tinnitus diagnosis. A disentangled auto-encoder is developed to decouple class-irrelevant information from the EEG signals to improve the classifying ability. The side-aware unsupervised domain adaptation module adapts the class-irrelevant information as domain variance to a new dataset and excludes the variance to obtain the class-distill features for the new dataset classification. It also aligns signals of left and right ears to overcome inherent EEG pattern difference. We compare DSUDA with state-of-the-art methods, and our model achieves significant improvements over competitors regarding comprehensive evaluation criteria. The results demonstrate our model can successfully generalize to a new dataset and effectively diagnose tinnitus.
Zhe Liu 0023, Lina Yao 0001, Jessica Monaghan, David McAlpine
IEEE J. Biomed. Health Informatics4
2023 Semi-Supervised EEG Clustering With Multiple Constraints
abstract
Electroencephalogram (EEG)-based applications in Brain-Computer Interfaces (BCIs, or Human-Machine Interfaces, HMIs), diagnosis of neurological disease, rehabilitation,etc, rely on supervised techniques such as EEG classification that requires given class labels or markers. Incomplete or incorrectly labeled or unlabeled EEG data are increasing with the ever-expanding amount of EEG data generated by such applications and the ambiguities these generate degrade the performance of supervised techniques. To address the challenging task of clustering EEG data with limitedprioriknowledge, we introduce a semi-supervised graph embedding EEG clustering approach termedConsEEGcwith multiple constraints,i.e., label-transformed connectivity constraints that constrains the connection or disconnection among EEG data, compactness-and-scatter constraint that constrains the intra-cluster compactness and inter-cluster scatter of EEG clusters, and fairness constraint that constrains the fair ratio of elements between EEG clusters, to make best use of limitedprioriknowledge of EEG data and to achieve better EEG clustering results.ConsEEGcis conducted with an optimization objective function that integrates pseudo label learning, least-square error minimization and multiple constraints, and it can quickly converge to local optima. The experiments demonstrate thatConsEEGccan efficiently yield good clustering results on various types of real-world EEG datasets, compared to state-of-the-art standard unsupervised and semi-supervised EEG/time series clustering algorithms.
Chenglong Dai, Jia Wu 0001, Jessica Monaghan, Guanghui Li 0001, Hao Peng 0001, Stefanie I. Becker, David McAlpine
IEEE Trans. Knowl. Data Eng.3
2022 Deep reinforcement learning guided graph neural networks for brain network analysis
Xusheng Zhao, Jia Wu 0001, Hao Peng 0001, Amin Beheshti, Jessica Monaghan, David McAlpine, Heivet Hernandez-Perez, Mark Dras, Qiong Dai, Philip S. Yu, Lifang He 0001
Neural Networks5
2019 A Convolutional Recurrent Attention Model for Subject-Independent EEG Signal Analysis
abstract
The electroencephalogram (EEG) signal is a medium to realize a brain-computer interface (BCI) system due to its zero clinical risk and portable acquisition devices. Current EEG-based BCI research usually requires a subject-specific adaptation step before a BCI can be employed by a new user. In contrast, the subject-independent scenario, where a well trained model can be directly applied to new users without precalibration, is particularly desired. Considering this critical gap, the focus in this letter is developing an effective EEG signal analysis adaptively applied to subject-independent settings. We present a convolutional recurrent attention model (CRAM) that utilizes a convolutional neural network to encode the high-level representation of EEG signals and a recurrent attention mechanism to explore the temporal dynamics of the EEG signals as well as to focus on the most discriminative temporal periods. Extensive experiments on a benchmark multiclass EEG dataset containing four movement intentions indicate that the proposed model is capable of exploiting the underlying invariant EEG patterns across different subjects and generalizing the patterns to new subjects with better performance than a series of state-of-the-art and baseline approaches by at least eight percentage points. The implementation code is made publicly available.11https://github.com/dalinzhang/CRAM.
Dalin Zhang 0001, Lina Yao 0001, Kaixuan Chen 0001, Jessica Monaghan
IEEE Signal Process. Lett.4
2016 Speech enhancement based on neural networks applied to cochlear implant coding strategies
abstract
Traditionally, algorithms that attempt to significantly improve speech intelligibility in noise for cochlear implant (CI) users have met with limited success, particularly in the presence of a fluctuating masker. In the present study, a speech enhancement algorithm integrating an artificial neural network (NN) into CI coding strategies is proposed. The algorithm decomposes the noisy input signal into time-frequency units, extracts a set of auditory-inspired features and feeds them to the NN to produce an estimation of which CI channels contain more perceptually important information (higher signal-to-noise ratio, SNR). This estimate is then used accordingly to retain a subset of channels for electrical stimulation, as in traditional n-of-m coding strategies. The proposed algorithm was tested with 10 normal-hearing participants listening to CI noise-vocoder simulations against a conventional Wiener filter based enhancement algorithm. Significant improvements in speech intelligibility in stationary and fluctuating noise were found over both unprocessed and Wiener filter processed conditions.
Federico Bolner, Tobias Goehring, Jessica Monaghan, Bas van Dijk, Jan Wouters, Stefan Bleeck
ICASSP3
2010 Auditory speech processing for scale-shift covariance and its evaluation in automatic speech recognition
abstract
The syllables of speech contain information about the vocal tract length (VTL) of the speaker as well as the phonetic message. Ideally, the pre-processor used for automatic speech recognition (ASR) should segregate the phonetic message from the VTL information. This paper describes a method to calculate VTL-invariant auditory feature vectors from speech, using a method in which the message and the VTL are segregated. Spectra produced by an auditory filterbank are summarized by a Gaussian mixture model (GMM) to produce a low-dimensional feature vector. These features are evaluated for robustness in comparison with conventional mel-frequency cepstral coefficients (MFCCs) using a hidden-Markov-model (HMM) recognizer. A dynamic, compressive gammachirp (dcGC) auditory filterbank is also introduced. The dcGC provides a level-dependent spectral analysis, with near instantaneous compression, and two-tone suppression.
Roy D. Patterson, Thomas C. Walters, Jessica Monaghan, Christian Feldbauer, Toshio Irino
ISCAS3