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Timothy John Sullivan

dblp:59/8577 · also Tim Sullivan 0001 · DBLP profile ↗
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5ranked-venue papers
1as first author
2since 2021 · last 2025
0000-0003-4081-8301ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 5 · 1 first-author · 2 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
3 papers
Trustworthy machine learning · 32% Generative modeling · 23% Representation and self-supervised learning · 23%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Computational science and engineering · 100%

Topics — the 6 heaviest of 8, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Trustworthy machine learning
calibration
0.612022
Testing Whether a Learning Procedure is Calibrated · J. Mach. Learn. Res. 2022
Machine learning › Learning theory
hypothesis testing
0.612022
Testing Whether a Learning Procedure is Calibrated · J. Mach. Learn. Res. 2022
Machine learning › Trustworthy machine learning › uncertainty estimation
probabilistic numerics
0.312018
Implicit Probabilistic Integrators for ODEs · NeurIPS 2018
Machine learning › Trustworthy machine learning › uncertainty estimation › probabilistic numerics
probabilistic ODE solvers
0.312018
Implicit Probabilistic Integrators for ODEs · NeurIPS 2018
Computational science and engineering
numerical solution of differential equations
0.312018
Implicit Probabilistic Integrators for ODEs · NeurIPS 2018
Machine learning › Deep learning architectures and training
neural operator
0.312025
Autoencoders in Function Space · J. Mach. Learn. Res. 2025

Methods — techniques the papers use, named apart from their topics

variational inference · 0.9stochastic differential equation · 0.9neural operator · 0.9gaussian process regression · 0.7bayesian calibration · 0.7adams-moulton method · 0.7hypothesis testing · 0.6bayesian inference · 0.6
YearPublicationVenuePosition
2025 Autoencoders in Function Space
abstract
Autoencoders have found widespread application in both their original deterministic form and in their variational formulation (VAEs). In scientific applications and in image processing it is often of interest to consider data that are viewed as functions; while discretisation (of differential equations arising in the sciences) or pixellation (of images) renders problems finite dimensional in practice, conceiving first of algorithms that operate on functions, and only then discretising or pixellating, leads to better algorithms that smoothly operate between resolutions. In this paper function-space versions of the autoencoder (FAE) and variational autoencoder (FVAE) are introduced, analysed, and deployed. Well-definedness of the objective governing VAEs is a subtle issue, particularly in function space, limiting applicability. For the FVAE objective to be well defined requires compatibility of the data distribution with the chosen generative model; this can be achieved, for example, when the data arise from a stochastic differential equation, but is generally restrictive. The FAE objective, on the other hand, is well defined in many situations where FVAE fails to be. Pairing the FVAE and FAE objectives with neural operator architectures that can be evaluated on any mesh enables new applications of autoencoders to inpainting, superresolution, and generative modelling of scientific data.
Justin Bunker, Mark A. Girolami, Hefin Lambley, Andrew M. Stuart, Timothy John Sullivan
J. Mach. Learn. Res.5
2022 Testing Whether a Learning Procedure is Calibrated
abstract
A learning procedure takes as input a dataset and performs inference for the parameters $\theta$ of a model that is assumed to have given rise to the dataset. Here we consider learning procedures whose output is a probability distribution, representing uncertainty about $\theta$ after seeing the dataset. Bayesian inference is a prime example of such a procedure, but one can also construct other learning procedures that return distributional output. This paper studies conditions for a learning procedure to be considered calibrated, in the sense that the true data-generating parameters are plausible as samples from its distributional output. A learning procedure whose inferences and predictions are systematically over- or under-confident will fail to be calibrated. On the other hand, a learning procedure that is calibrated need not be statistically efficient. A hypothesis-testing framework is developed in order to assess, using simulation, whether a learning procedure is calibrated. Several vignettes are presented to illustrate different aspects of the framework.
Jon Cockayne, Matthew M. Graham, Chris J. Oates, Timothy John Sullivan, Onur Teymur
J. Mach. Learn. Res.4
2018 Implicit Probabilistic Integrators for ODEs
abstract
We introduce a family of implicit probabilistic integrators for initial value problems (IVPs), taking as a starting point the multistep Adams–Moulton method. The implicit construction allows for dynamic feedback from the forthcoming time-step, in contrast to previous probabilistic integrators, all of which are based on explicit methods. We begin with a concise survey of the rapidly-expanding field of probabilistic ODE solvers. We then introduce our method, which builds on and adapts the work of Conrad et al. (2016) and Teymur et al. (2016), and provide a rigorous proof of its well-definedness and convergence. We discuss the problem of the calibration of such integrators and suggest one approach. We give an illustrative example highlighting the effect of the use of probabilistic integrators—including our new method—in the setting of parameter inference within an inverse problem.
Onur Teymur, Han Cheng Lie, Timothy John Sullivan, Ben Calderhead
NeurIPS3
2005 A knowledge-based approach for classifying lake water chemistry
Michael C. Saunders, Timothy John Sullivan, B. L. Nash, K. A. Tonnessen, B. J. Miller
Knowl. Based Syst.2
2005 Application of a regionalized knowledge-based model for classifying the impacts of nitrogen, sulfur, and organic acids on lakewater chemistry
Timothy John Sullivan, Michael C. Saunders, K. A. Tonnessen, B. L. Nash, B. J. Miller
Knowl. Based Syst.1