Hiroyuki Nakahara

dblp:63/4120 · DBLP profile ↗
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27ranked-venue papers
12as first author
1since 2021 · last 2022
0000-0001-6891-1175ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 24 · 10 first-author · 1 since 2021Applied, interdisciplinary, general and emerging computing · 2 · 1 first-authorSystems, architecture and hardware · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Theoretical computer science
3 papers
Mathematical optimization · 65% Information theory · 35%
Artificial intelligence
4 papers
Representation and self-supervised learning · 56% Probabilistic and Bayesian machine learning · 22% Reinforcement learning · 8%
Interdisciplinary, comprehensive, and emerging computing
4 papers
Bioinformatics and computational biology · 100%

Topics — the 17 heaviest of 18, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Representation and self-supervised learning
tensor decomposition
0.312018
Legendre Decomposition for Tensors · NeurIPS 2018
Information theory
information geometry
0.312017
Tensor Balancing on Statistical Manifold · ICML 2017
Mathematical optimization › numerical analysis
matrix scaling
0.312017
Tensor Balancing on Statistical Manifold · ICML 2017
Mathematical optimization › tensor optimization
tensor scaling
0.312017
Tensor Balancing on Statistical Manifold · ICML 2017
Machine learning › Probabilistic and Bayesian machine learning
boltzmann machine
0.112017
Tensor Balancing on Statistical Manifold · ICML 2017
Machine learning › Reinforcement learning
actor-critic methods
0.012004
Responding to Modalities with Different Latencies · NIPS 2004
Robotics › Motion planning and robot control › robot control › sensor-based control
sensorimotor control
0.012004
Responding to Modalities with Different Latencies · NIPS 2004
Bioinformatics and computational biology
computational neuroscience
0.022001
Information-Geometric Decomposition in Spike Analysis · NIPS 2001
Dynamics of Attention as Near Saddle-Node Bifurcation Behavior · NIPS 1995
Bioinformatics and computational biology
gene expression analysis
0.012003
Gene Interaction in DNA Microarray Data Is Decomposed by Information Geometric Measure · Bioinform. 2003
Bioinformatics and computational biology › neuroscience › neuroinformatics › neural data analysis
spike train analysis
0.012001
Information-Geometric Decomposition in Spike Analysis · NIPS 2001
Bioinformatics and computational biology › neuroscience › neuroinformatics
neural data analysis
0.011999
Population Decoding Based on an Unfaithful Model · NIPS 1999
Bioinformatics and computational biology › neuroscience › neuroinformatics › neural data analysis
neural population decoding
0.011999
Population Decoding Based on an Unfaithful Model · NIPS 1999
Machine learning › Probabilistic and Bayesian machine learning › probabilistic inference
approximate inference
0.011998
Convergence of the Wake-Sleep Algorithm · NIPS 1998
Machine learning › Optimization for machine learning
convergence analysis
0.011998
Convergence of the Wake-Sleep Algorithm · NIPS 1998
Machine learning › Probabilistic and Bayesian machine learning › probabilistic inference › approximate inference › variational inference
wake-sleep algorithm
0.011998
Convergence of the Wake-Sleep Algorithm · NIPS 1998
Robotics › Robot manipulation › manipulation control
reaching
0.012004
Responding to Modalities with Different Latencies · NIPS 2004
Mathematical optimization › dynamical systems
bifurcation analysis
0.011995
Dynamics of Attention as Near Saddle-Node Bifurcation Behavior · NIPS 1995

Methods — techniques the papers use, named apart from their topics

newton's method · 0.6möbius inversion · 0.6information geometry · 0.4KL divergence minimization · 0.3mutual information decomposition · 0.1softmax combination · 0.0actor-critic · 0.0information geometric measure · 0.0saddle-node bifurcation analysis · 0.0unfaithful model · 0.0wake-sleep algorithm · 0.0
YearPublicationVenuePosition
2022 Meta-learning, social cognition and consciousness in brains and machines
abstract
The intersection between neuroscience and artificial intelligence (AI) research has created synergistic effects in both fields. While neuroscientific discoveries have inspired the development of AI architectures, new ideas and algorithms from AI research have produced new ways to study brain mechanisms. A well-known example is the case of reinforcement learning (RL), which has stimulated neuroscience research on how animals learn to adjust their behavior to maximize reward. In this review article, we cover recent collaborative work between the two fields in the context of meta-learning and its extension to social cognition and consciousness. Meta-learning refers to the ability to learn how to learn, such as learning to adjust hyperparameters of existing learning algorithms and how to use existing models and knowledge to efficiently solve new tasks. This meta-learning capability is important for making existing AI systems more adaptive and flexible to efficiently solve new tasks. Since this is one of the areas where there is a gap between human performance and current AI systems, successful collaboration should produce new ideas and progress. Starting from the role of RL algorithms in driving neuroscience, we discuss recent developments in deep RL applied to modeling prefrontal cortex functions. Even from a broader perspective, we discuss the similarities and differences between social cognition and meta-learning, and finally conclude with speculations on the potential links between intelligence as endowed by model-based RL and consciousness. For future work we highlight data efficiency, autonomy and intrinsic motivation as key research areas for advancing both fields.
Angela Langdon, Matt M. Botvinick, Hiroyuki Nakahara, Keiji Tanaka, Masayuki Matsumoto, Ryota Kanai
Neural Networks3
2018 Legendre Decomposition for Tensors
abstract
We present a novel nonnegative tensor decomposition method, called Legendre decomposition, which factorizes an input tensor into a multiplicative combination of parameters. Thanks to the well-developed theory of information geometry, the reconstructed tensor is unique and always minimizes the KL divergence from an input tensor. We empirically show that Legendre decomposition can more accurately reconstruct tensors than other nonnegative tensor decomposition methods.
Mahito Sugiyama, Hiroyuki Nakahara, Koji Tsuda
NeurIPS2
2017 A demonstration of the GUINNESS: A GUI based neural NEtwork SyntheSizer for an FPGA
abstract
Summary form only given. The GUINNESS is a tool flow for the deep neural network toward FPGA implementation [3,4,5] based on the GUI (Graphical User Interface) including both the binarized deep neural network training on GPUs and the inference on an FPGA. It generates the trained the Binarized deep neural network [2] on the desktop PC, then, it generates the bitstream by using standard the FPGA CAD tool flow. All the operation is done on the GUI, thus, the designer is not necessary to write any scripts to descript the neural network structure, training behaviour, only specify the values for hyper parameters. After finished the training, it automatically generates C++ codes to synthesis the bitstream using the Xilinx SDSoC system design tool flow. Thus, our tool flow is suitable for the software programmers who are not familiar with the FPGA design.
Hiroyuki Nakahara, Haruyoshi Yonekawa, Tomoya Fujii, Masayuki Shimoda, Simpei Sato
FPL1
2017 Tensor Balancing on Statistical Manifold
abstract
We solve tensor balancing, rescaling an Nth order nonnegative tensor by multiplying N tensors of order N - 1 so that every fiber sums to one. This generalizes a fundamental process of matrix balancing used to compare matrices in a wide range of applications from biology to economics. We present an efficient balancing algorithm with quadratic convergence using Newton’s method and show in numerical experiments that the proposed algorithm is several orders of magnitude faster than existing ones. To theoretically prove the correctness of the algorithm, we model tensors as probability distributions in a statistical manifold and realize tensor balancing as projection onto a submanifold. The key to our algorithm is that the gradient of the manifold, used as a Jacobian matrix in Newton’s method, can be analytically obtained using the Möbius inversion formula, the essential of combinatorial mathematics. Our model is not limited to tensor balancing, but has a wide applicability as it includes various statistical and machine learning models such as weighted DAGs and Boltzmann machines.
Mahito Sugiyama, Hiroyuki Nakahara, Koji Tsuda
ICML2
2016 Information decomposition on structured space
abstract
We build information geometry for a partially ordered set of variables and define the orthogonal decomposition of information theoretic quantities. The natural connection between information geometry and order theory leads to efficient decomposition algorithms. This generalization of Amari's seminal work on hierarchical decomposition of probability distributions on event combinations enables us to analyze high-order statistical interactions arising in neuroscience, biology, and machine learning.
Mahito Sugiyama, Hiroyuki Nakahara, Koji Tsuda
ISIT2
2010 Internal-Time Temporal Difference Model for Neural Value-Based Decision Making
abstract
The temporal difference (TD) learning framework is a major paradigm for understanding value-based decision making and related neural activities (e.g., dopamine activity). The representation of time in neural processes modeled by a TD framework, however, is poorly understood. To address this issue, we propose a TD formulation that separates the time of the operator (neural valuation processes), which we refer to as internal time, from the time of the observer (experiment), which we refer to as conventional time. We provide the formulation and theoretical characteristics of this TD model based on internal time, called internal-time TD, and explore the possible consequences of the use of this model in neural value-based decision making. Due to the separation of the two times, internal-time TD computations, such as TD error, are expressed differently, depending on both the time frame and time unit. We examine this operator-observer problem in relation to the time representation used in previous TD models. An internal time TD value function exhibits the co-appearance of exponential and hyperbolic discounting at different delays in intertemporal choice tasks. We further examine the effects of internal time noise on TD error, the dynamic construction of internal time, and the modulation of internal time with the internal time hypothesis of serotonin function. We also relate the internal TD formulation to research on interval timing and subjective time.
Hiroyuki Nakahara, Sivaramakrishnan Kaveri
Neural Comput.1
2006 Correlation and Independence in the Neural Code
abstract
The decoding scheme of a stimulus can be different from the stochastic encoding scheme in the neural population coding. The stochastic fluctuations are not independent in general, but an independent version could be used for the ease of decoding. How much information is lost by using this unfaithful model for decoding? There are discussions concerning loss of information (Nirenberg & Latham, 2003; Schneidman, Bialek, & Berry, 2003). We elucidate the Nirenberg-Latham loss from the point of view of information geometry.
Shun-ichi Amari, Hiroyuki Nakahara
Neural Comput.2
2006 A Comparison of Descriptive Models of a Single Spike Train by Information-Geometric Measure
abstract
In examining spike trains, different models are used to describe their structure. The different models often seem quite similar, but because they are cast in different formalisms, it is often difficult to compare their predictions. Here we use the information-geometric measure, an orthogonal coordinate representation of point processes, to express different models of stochastic point processes in a common coordinate system. Within such a framework, it becomes straightforward to visualize higher-order correlations of different models and thereby assess the differences between models. We apply the information-geometric measure to compare two similar but not identical models of neuronal spike trains: the inhomogeneous Markov and the mixture of Poisson models. It is shown that they differ in the secondand higher-order interaction terms. In the mixture of Poisson model, the second- and higher-order interactions are of comparable magnitude within each order, whereas in the inhomogeneous Markov model, they have alternating signs over different orders. This provides guidance about what measurements would effectively separate the two models. As newer models are proposed, they also can be compared to these models using information geometry.
Hiroyuki Nakahara, Shun-ichi Amari, Barry J. Richmond
Neural Comput.1
2006 Extended LATER model can account for trial-by-trial variability of both pre- and post-processes
Hiroyuki Nakahara, Kae Nakamura, Okihide Hikosaka
Neural Networks1
2005 Difficulty of Singularity in Population Coding
abstract
Fisher information has been used to analyze the accuracy of neural population coding. This works well when the Fisher information does not degenerate, but when two stimuli are presented to a population of neurons, a singular structure emerges by their mutual interactions. In this case, the Fisher information matrix degenerates, and the regularity condition ensuring the Cramér-Rao paradigm of statistics is violated. An animal shows pathological behavior in such a situation. We present a novel method of statistical analysis to understand information in population coding in which algebraic singularity plays a major role. The method elucidates the nature of the pathological case by calculating the Fisher information. We then suggest that synchronous firing can resolve singularity and show a method of analyzing the binding problem in terms of the Fisher information. Our method integrates a variety of disciplines in population coding, such as nonregular statistics, Bayesian statistics, singularity in algebraic geometry, and synchronous firing, under the theme of Fisher information.
Shun-ichi Amari, Hiroyuki Nakahara
Neural Comput.2
2004 Responding to Modalities with Different Latencies
abstract
Motor control depends on sensory feedback in multiple modalities with different latencies. In this paper we consider within the framework of re- inforcement learning how different sensory modalities can be combined and selected for real-time, optimal movement control. We propose an actor-critic architecture with multiple modules, whose output are com- bined using a softmax function. We tested our architecture in a simu- lation of a sequential reaching task. Reaching was initially guided by visual feedback with a long latency. Our learning scheme allowed the agent to utilize the somatosensory feedback with shorter latency when the hand is near the experienced trajectory. In simulations with different latencies for visual and somatosensory feedback, we found that the agent depended more on feedback with shorter latency.
Fredrik Bissmarck, Hiroyuki Nakahara, Kenji Doya, Okihide Hikosaka
NIPS2
2004 Information processing in a neuron ensemble with the multiplicative correlation structure
Si Wu 0001, Shun-ichi Amari, Hiroyuki Nakahara
Neural Networks3
2003 On different ensembles of kernel machines
Michiko Yamana, Hiroyuki Nakahara, Massimiliano Pontil, Shun-ichi Amari
ESANN2
2003 Gene Interaction in DNA Microarray Data Is Decomposed by Information Geometric Measure
abstract
MOTIVATION: Given the vast amount of gene expression data, it is essential to develop a simple and reliable method of investigating the fine structure of gene interaction. We show how an information geometric measure achieves this. RESULTS: We introduce an information geometric measure of binary random vectors and show how this measure reveals the fine structure of gene interaction. In particular, we propose an iterative procedure by using this measure (called IPIG). The procedure finds higher-order dependencies which may underlie the interaction between two genes of interest. To demonstrate the method, we investigate the interaction between the two genes of interest in the data from human acute lymphoblastic leukemia cells. The method successfully discovered biologically known findings and also selected other genes as hidden causes that constitute the interaction. AVAILABILITY: Softwares are currently not available but are possibly made available in future at http://www.mns.brain.riken.go.jp/~nakahara/DNA_pub.html where all the related information is also linked.
Hiroyuki Nakahara, Shin-ichi Nishimura, Masato Inoue, Gen Hori, Shun-ichi Amari
Bioinform.1
2003 Synchronous Firing and Higher-Order Interactions in Neuron Pool
abstract
The stochastic mechanism of synchronous firing in a population of neurons is studied from the point of view of information geometry. Higher-order interactions of neurons, which cannot be reduced to pairwise correlations, are proved to exist in synchronous firing. In a neuron pool where each neuron fires stochastically, the probability distribution q(r) of the activity r, which is the fraction of firing neurons in the pool, is studied. When q(r) has a widespread distribution, in particular, when q(r) has two peaks, the neurons fire synchronously at one time and are quiescent at other times. The mechanism of generating such a probability distribution is interesting because the activity r is concentrated on its mean value when each neuron fires independently, because of the law of large numbers. Even when pairwise interactions, or third-order interactions, exist, the concentration is not resolved. This shows that higher-order interactions are necessary to generate widespread activity distributions. We analyze a simple model in which neurons receive common overlapping inputs and prove that such a model can have a widespread distribution of activity, generating higher-order stochastic interactions.
Shun-ichi Amari, Hiroyuki Nakahara, Si Wu 0001, Yutaka Sakai
Neural Comput.2
2002 Asymptotic behaviors of population codes
Si Wu 0001, Shun-ichi Amari, Hiroyuki Nakahara
Neurocomputing3
2002 Information-Geometric Measure for Neural Spikes
abstract
This study introduces information-geometric measures to analyze neural firing patterns by taking not only the second-order but also higher-order interactions among neurons into account. Information geometry provides useful tools and concepts for this purpose, including the orthogonality of coordinate parameters and the Pythagoras relation in the Kullback-Leibler divergence. Based on this orthogonality, we show a novel method for analyzing spike firing patterns by decomposing the interactions of neurons of various orders. As a result, purely pairwise, triple-wise, and higher-order interactions are singled out. We also demonstrate the benefits of our proposal by using several examples.
Hiroyuki Nakahara, Shun-ichi Amari
Neural Comput.1
2002 Self-Organization in the Basal Ganglia with Modulation of Reinforcement Signals
abstract
Self-organization is one of fundamental brain computations for forming efficient representations of information. Experimental support for this idea has been largely limited to the developmental and reorganizational formation of neural circuits in the sensory cortices. We now propose that self-organization may also play an important role in short-term synaptic changes in reward-driven voluntary behaviors. It has recently been shown that many neurons in the basal ganglia change their sensory responses flexibly in relation to rewards. Our computational model proposes that the rapid changes in striatal projection neurons depend on the subtle balance between the Hebb-type mechanisms of excitation and inhibition, which are modulated by reinforcement signals. Simulations based on the model are shown to produce various types of neural activity similar to those found in experiments.
Hiroyuki Nakahara, Shun-ichi Amari, Okihide Hikosaka
Neural Comput.1
2002 Population Coding and Decoding in a Neural Field: A Computational Study
abstract
This study uses a neural field model to investigate computational aspects of population coding and decoding when the stimulus is a single variable. A general prototype model for the encoding process is proposed, in which neural responses are correlated, with strength specified by a gaussian function of their difference in preferred stimuli. Based on the model, we study the effect of correlation on the Fisher information, compare the performances of three decoding methods that differ in the amount of encoding information being used, and investigate the implementation of the three methods by using a recurrent network. This study not only rediscovers main results in existing literatures in a unified way, but also reveals important new features, especially when the neural correlation is strong. As the neural correlation of firing becomes larger, the Fisher information decreases drastically. We confirm that as the width of correlation increases, the Fisher information saturates and no longer increases in proportion to the number of neurons. However, we prove that as the width increases further--wider than (sqrt)2 times the effective width of the turning function--the Fisher information increases again, and it increases without limit in proportion to the number of neurons. Furthermore, we clarify the asymptotic efficiency of the maximum likelihood inference (MLI) type of decoding methods for correlated neural signals. It shows that when the correlation covers a nonlocal range of population (excepting the uniform correlation and when the noise is extremely small), the MLI type of method, whose decoding error satisfies the Cauchy-type distribution, is not asymptotically efficient. This implies that the variance is no longer adequate to measure decoding accuracy.
Si Wu 0001, Shun-ichi Amari, Hiroyuki Nakahara
Neural Comput.3
2002 Attention modulation of neural tuning through peak and base rate in correlated firing
Hiroyuki Nakahara, Shun-ichi Amari
Neural Networks1
2001 Information-Geometric Decomposition in Spike Analysis
abstract
We present an information-geometric measure to systematically investigate neuronal firing patterns, taking account not only of the second-order but also of higher-order interactions. We begin with the case of two neurons for illustration and show how to test whether or not any pairwise correlation in one period is significantly different from that in the other period. In order to test such a hy(cid:173) pothesis of different firing rates, the correlation term needs to be singled out 'orthogonally' to the firing rates, where the null hypoth(cid:173) esis might not be of independent firing. This method is also shown to directly associate neural firing with behavior via their mutual information, which is decomposed into two types of information, conveyed by mean firing rate and coincident firing, respectively. Then, we show that these results, using the 'orthogonal' decompo(cid:173) sition, are naturally extended to the case of three neurons and n neurons in general.
Hiroyuki Nakahara, Shun-ichi Amari
NIPS1
2001 Attention Modulation of Neural Tuning Through Peak and Base Rate
abstract
This study investigates the influence of attention modulation on neural tuning functions. It has been shown in experiments that attention modulation alters neural tuning curves. Attention has been considered at least to serve to resolve limiting capacities and to increase the sensitivity to attended stimulus, while the exact functions of attention are still under debate. Inspired by recent experimental results on attention modulation, we investigate the influence of changes in the height and base rate of the tuning curve on the encoding accuracy, using the Fisher information. Under an assumption of stimulus-conditional independence of neural responses, we derive explicit conditions that determine when the height and base rate should be increased or decreased to improve encoding accuracy. Notably, a decrease in the tuning height and base rate can improve the encoding accuracy in some cases. Our theoretical results can predict the effective size of attention modulation on the neural population with respect to encoding accuracy. We discuss how our method can be used quantitatively to evaluate different aspects of attention function.
Hiroyuki Nakahara, Si Wu 0001, Shun-ichi Amari
Neural Comput.1
2001 Population Coding with Correlation and an Unfaithful Model
abstract
This study investigates a population decoding paradigm in which the maximum likelihood inference is based on an unfaithful decoding model (UMLI). This is usually the case for neural population decoding because the encoding process of the brain is not exactly known or because a simplified decoding model is preferred for saving computational cost. We consider an unfaithful decoding model that neglects the pair-wise correlation between neuronal activities and prove that UMLI is asymptotically efficient when the neuronal correlation is uniform or of limited range. The performance of UMLI is compared with that of the maximum likelihood inference based on the faithful model and that of the center-of-mass decoding method. It turns out that UMLI has advantages of decreasing the computational complexity remarkably and maintaining high-level decoding accuracy. Moreover, it can be implemented by a biologically feasible recurrent network (Pouget, Zhang, Deneve, & Latham, 1998). The effect of correlation on the decoding accuracy is also discussed.
Si Wu 0001, Hiroyuki Nakahara, Shun-ichi Amari
Neural Comput.2
1999 Population Decoding Based on an Unfaithful Model
Si Wu 0001, Hiroyuki Nakahara, Noboru Murata, Shun-ichi Amari
NIPS2
1998 Convergence of the Wake-Sleep Algorithm
Shiro Ikeda, Shun-ichi Amari, Hiroyuki Nakahara
NIPS3
1998 Near Saddle-Node Bifurcation Behavior as Dynamics in Working Memory for Goal-Directed Behavior
abstract
In consideration of working memory as a means for goal-directed behavior in nonstationary environments, we argue that the dynamics of working memory should satisfy two opposing demands: long-term maintenance and quick transition. These two characteristics are contradictory within the linear domain. We propose the near-saddle-node bifurcation behavior of a sigmoidal unit with a self-connection as a candidate of the dynamical mechanism that satisfies both of these demands. It is shown in evolutionary programming experiments that the near-saddle-node bifurcation behavior can be found in recurrent networks optimized for a task that requires efficient use of working memory. The results suggests that the near-saddle-node bifurcation behavior may be a functional necessity for survival in nonstationary environments.
Hiroyuki Nakahara, Kenji Doya
Neural Comput.1
1995 Dynamics of Attention as Near Saddle-Node Bifurcation Behavior
Hiroyuki Nakahara, Kenji Doya
NIPS1