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Mete Celik

dblp:76/950 · DBLP profile ↗
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17ranked-venue papers
7as first author
5since 2021 · last 2025
0000-0002-1488-1502ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 11 · 3 first-author · 4 since 2021Databases, data management, data science and information retrieval · 8 · 5 first-authorApplied, interdisciplinary, general and emerging computing · 2Systems, architecture and hardware · 1 · 1 first-author · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Databases, data mining, and information retrieval
4 papers
Data mining · 85% Spatial and temporal data management · 15%

Topics — the 7 heaviest of 10, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
protein structure prediction
0.412019
Developing structural profile matrices for protein secondary structure and solvent accessibility prediction · Bioinform. 2019
Bioinformatics and computational biology › protein structure prediction
secondary structure prediction
0.412019
Developing structural profile matrices for protein secondary structure and solvent accessibility prediction · Bioinform. 2019
Bioinformatics and computational biology › protein structure prediction › protein structural feature prediction
solvent accessibility prediction
0.412019
Developing structural profile matrices for protein secondary structure and solvent accessibility prediction · Bioinform. 2019
Data mining
pattern mining
0.242008
Mixed-Drove Spatiotemporal Co-Occurrence Pattern Mining · IEEE Trans. Knowl. Data Eng. 2008
Mixed-Drove Spatio-Temporal Co-occurence Pattern Mining: A Summary of Results · ICDM 2006
A Join-Less Approach for Co-Location Pattern Mining: A Summary of Results · ICDM 2005
Data mining › structured data mining › spatial data mining
spatial co-location pattern mining
0.122007
Zonal Co-location Pattern Discovery with Dynamic Parameters · ICDM 2007
A Join-Less Approach for Co-Location Pattern Mining: A Summary of Results · ICDM 2005
Data mining
spatiotemporal data mining
0.112008
Mixed-Drove Spatiotemporal Co-Occurrence Pattern Mining · IEEE Trans. Knowl. Data Eng. 2008
Spatial and temporal data management
spatial indexing
0.112007
Zonal Co-location Pattern Discovery with Dynamic Parameters · ICDM 2007

Methods — techniques the papers use, named apart from their topics

structural profile matrix · 0.4PFAM family derivation · 0.4monotonic composite interest measure · 0.1indexing structures · 0.1candidate pruning · 0.1MDCOP mining · 0.1join-less mining · 0.1instance-lookup · 0.1
YearPublicationVenuePosition
2025 Discovering and Ranking Urban Social Clusters Out of Streaming Social Media Datasets
abstract
ABSTRACT Urban social media mining is the process of discovering urban patterns from spatio‐temporal social media datasets. Urban social clusters are the clusters formed by the social media posts of users living in cities at a certain time and place. Discovering and identifying urban social clusters is of great importance for urban and regional planning, target audience identification, a better understanding of city dynamics and so forth. Discovering and ranking urban social clusters out of streaming social media datasets require efficient filtering approaches and mining algorithms. In the literature, there are several studies performed that address the discovery of the importance of urban clusters. Most of these studies take into account the spatial expansions over time and the changes in the numbers of elements within clusters when identifying the significance of urban clusters. However, in contrast to these studies, we have also considered cluster temporal formation stability, spatial density variation, and the impact of meta‐information on urban social clusters. In this study, Temporal, Spatial, and Meta Important Urban Social Clusters Miner (TSMIUSC‐Miner) algorithm is proposed. In the proposed algorithm, urban social clusters are discovered, and their importance relative to each other are compared and ranked. The temporal, spatial and meta importance scores of the clusters are calculated and then, the clusters that satisfy predefined score thresholds are discovered. The performance of the proposed TSMIUSC‐Miner algorithm compared with that of a naive approach using real‐life streaming Twitter/X dataset. The results showed that the proposed TSMIUSC‐Miner algorithm outperforms the naive approach in terms of execution time.
Mete Celik, Ahmet Sakir Dokuz, Alper Ecemis, Emre Erdogmus
Concurr. Comput. Pract. Exp.1
2024 Parametric RSigELU: a new trainable activation function for deep learning
abstract
Abstract Activation functions are used to extract meaningful relationships from real-world problems with the help of deep learning models. Thus, the development of activation functions which affect deep learning models’ performances is of great interest to researchers. In the literature, mostly, nonlinear activation functions are preferred since linear activation functions limit the learning performances of the deep learning models. Non-linear activation functions can be classified as fixed-parameter and trainable activation functions based on whether the activation function parameter is fixed (i.e., user-given) or modified during the training process of deep learning models. The parameters of the fixed-parameter activation functions should be specified before the deep learning model training process. However, it takes too much time to determine appropriate function parameter values and can cause the slow convergence of the deep learning model. In contrast, trainable activation functions whose parameters are updated in each iteration of deep learning models training process achieve faster and better convergence by obtaining the most suitable parameter values for the datasets and deep learning architectures. This study proposes parametric RSigELU (P+RSigELU) trainable activation functions, such as P+RSigELU Single (P+RSigELUS) and P+RSigELU Double (P+RSigELUD), to improve the performance of fixed-parameter activation function of RSigELU. The performances of the proposed trainable activation functions were evaluated on the benchmark datasets of MNIST, CIFAR-10, and CIFAR-100 datasets. Results show that the proposed activation functions outperforms PReLU, PELU, ALISA, P+FELU, PSigmoid, and GELU activation functions found in the literature. To access the codes of the activation function; https://github.com/serhatklc/P-RsigELU-Activation-Function .
Serhat Kiliçarslan, Mete Celik
Neural Comput. Appl.2
2022 KAF + RSigELU: a nonlinear and kernel-based activation function for deep neural networks
Serhat Kiliçarslan, Mete Celik
Neural Comput. Appl.2
2022 4D-GWR: geographically, altitudinal, and temporally weighted regression
Murat Tasyurek, Mete Celik
Neural Comput. Appl.2
2021 RSigELU: A nonlinear activation function for deep neural networks
Serhat Kiliçarslan, Mete Celik
Expert Syst. Appl.2
2020 RNN-GWR: A geographically weighted regression approach for frequently updated data
Murat Tasyurek, Mete Celik
Neurocomputing2
2019 Developing structural profile matrices for protein secondary structure and solvent accessibility prediction
abstract
MOTIVATION: Predicting secondary structure and solvent accessibility of proteins are among the essential steps that preclude more elaborate 3D structure prediction tasks. Incorporating class label information contained in templates with known structures has the potential to improve the accuracy of prediction methods. Building a structural profile matrix is one such technique that provides a distribution for class labels at each amino acid position of the target. RESULTS: In this paper, a new structural profiling technique is proposed that is based on deriving PFAM families and is combined with an existing approach. Cross-validation experiments on two benchmark datasets and at various similarity intervals demonstrate that the proposed profiling strategy performs significantly better than Homolpro, a state-of-the-art method for incorporating template information, as assessed by statistical hypothesis tests. AVAILABILITY AND IMPLEMENTATION: The DSPRED method can be accessed by visiting the PSP server at http://psp.agu.edu.tr. Source code and binaries are freely available at https://github.com/yusufzaferaydin/dspred. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Zafer Aydin, Nuh Azginoglu, Halil Ibrahim Bilgin, Mete Celik
Bioinform.4
2018 Discovering socially similar users in social media datasets based on their socially important locations
Mete Celik, Ahmet Sakir Dokuz
Inf. Process. Manag.1
2017 Discovering socially important locations of social media users
Ahmet Sakir Dokuz, Mete Celik
Expert Syst. Appl.2
2015 Partial spatio-temporal co-occurrence pattern mining
Mete Celik
Knowl. Inf. Syst.1
2008 Should SDBMS support a join index?: a case study from CrimeStat
abstract
Given a spatial crime data warehouse, that is updated infrequently and a set of operations O as well as constraints of storage and update overheads, the index type selection problem is to find a set of index types that can reduce the I/O cost of the set of operations. The index type selection problem is important to improve user experience and system resource utilization in crucial spatial statistics application domains such as mapping and analysis for public safety, public health, ecology, and transportation. This is because the response time of frequent queries based on the set of operations can be improved significantly by an effective choice of index types. Many spatial statistical queries in these application domains make use of a spatial neighborhood matrix, known as W in spatial statistics, which can be thought of as a spatial self-join in spatial database terminology. Currently supported index types such as B-Tree and R-Tree families do not adequately support spatial statistical analysis because they require on-the-fly computation of the WMatrix, slowing down spatial statistical analysis. In contrast, this paper argues that Spatial Database Management Systems (SDBMS) should support a join index to materialize the WMatrix and eliminate on-the-fly computation of the common selfjoin. A detailed case study using the popular spatial statistical software package for public safety, namely CrimeStat, shows that join indices can significantly speed up spatial analysis such as calculation of Ripley's K and identification of hotspots.
Pradeep Mohan, Ronald E. Wilson, Shashi Shekhar 0001, Betsy George, Ned Levine, Mete Celik
GIS6
2008 Mixed-Drove Spatiotemporal Co-Occurrence Pattern Mining
abstract
Mixed-drove spatio-temporal co-occurrence patterns (MDCOPs) represent subsets of two or more different object-types whose instances are often located in spatial and temporal proximity. Discovering MDCOPs is an important problem with many applications such as identifying tactics in battlefields, games, and predator-prey interactions. However, mining MDCOPs is computationally very expensive because the interest measures are computationally complex, datasets are larger due to the archival history, and the set of candidate patterns is exponential in the number of object-types. We propose a monotonic composite interest measure for discovering MDCOPs and novel MDCOP mining algorithms. Analytical results show that the proposed algorithms are correct and complete. Experimental results also show that the proposed methods are computationally more efficient than naive alternatives.
Mete Celik, Shashi Shekhar 0001, James P. Rogers, James A. Shine
IEEE Trans. Knowl. Data Eng.1
2007 Zonal Co-location Pattern Discovery with Dynamic Parameters
abstract
Zonal co-location patterns represent subsets of featuretypes that are frequently located in a subset of space (i.e., zone). Discovering zonal spatial co-location patterns is an important problem with many applications in areas such as ecology, public health, and homeland defense. However, discovering these patterns with dynamic parameters (i.e., repeated specification of zone and interest measure values according to user preferences) is computationally complex due to the repetitive mining process. Also, the set of candidate patterns is exponential in the number of feature types, and spatial datasets are huge. Previous studies have focused on discovering global spatial co-location patterns with a fixed interest measure threshold. In this paper, we propose an indexing structure for co-location patterns and propose algorithms (Zoloc-Miner) to discover zonal colocation patterns efficiently for dynamic parameters. Extensive experimental evaluation shows our proposed approaches are scalable, efficient, and outperform na¨ive alternatives.
Mete Celik, James M. Kang, Shashi Shekhar 0001
ICDM1
2006 Mixed-Drove Spatio-Temporal Co-occurence Pattern Mining: A Summary of Results
abstract
Mixed-drove spatio-temporal co-occurrence patterns (MDCOPs) represent subsets of object-types that are located together in space and time. Discovering MDCOPs is an important problem with many applications such as identifying tactics in battlefields, games, and predator-prey interactions. However, mining MDCOPs is computationally very expensive because the interest measures are computationally complex, datasets are larger due to the archival history, and the set of candidate patterns is exponential in the number of object-types. We propose a monotonic composite interest measure for discovering MDCOPs and a novel MDCOP mining algorithm. Analytical and experimental results show that the proposed algorithm is correct and complete. Results also show the proposed method is computationally more efficient than naïve alternatives.
Mete Celik, Shashi Shekhar 0001, James P. Rogers, James A. Shine, Jin Soung Yoo
ICDM1
2006 Sustained Emerging Spatio-Temporal Co-occurrence Pattern Mining: A Summary of Results
abstract
Sustained emerging spatio-temporal co-occurrence patterns (SECOPs) represent subsets of object-types that are increasingly located together in space and time. Discovering SECOPs is important due to many applications, e.g., predicting emerging infectious diseases, predicting defensive and offensive intent from troop movement patterns, and novel predator-prey interactions. However, mining SECOPs is computationally very expensive because the interest measures are computationally complex, datasets are larger due to the archival history, and the set of candidate patterns is exponential in the number of object-types. We propose a monotonic interest measure for mining SECOPs and a novel SECOP mining algorithm. Analytical and experimental results show that the proposed algorithm is correct, complete, and computationally faster than related approaches. Results also show the proposed algorithm is computationally more efficient than naïve alternatives.
Mete Celik, Shashi Shekhar 0001, James P. Rogers, James A. Shine
ICTAI1
2006 Discovery of Co-evoluting Spatial Co-located Event Sets
abstract
A spatial co-located event set represents a subset of spatial events whose instances are located in a spatial neighborhood. The discovery of co-evolving spatial event sets involves finding co-located event sets whose spatial prevalence variations over time are similar to a specific query sequence. Mining co-evolving spatial event sets is computationally challenging due to the high computational cost of finding co-located event instances on continuous geographic space, large temporal space and a composite interest measure, i.e., the spatial prevalence time sequence of a co-located event set. We propose a novel method for mining co-evolving spatial event sets. We analyze the proposed algorithm in terms of correctness and completeness, and experimentally evaluate the algorithm.
Jin Soung Yoo, Shashi Shekhar 0001, Sangho Kim 0001, Mete Celik
SDM4
2005 A Join-Less Approach for Co-Location Pattern Mining: A Summary of Results
abstract
Spatial co-location patterns represent the subsets of features whose instances are frequently located together in geographic space. Co-location pattern discovery presents challenges since the instances of spatial features are embedded in a continuous space and share a variety of spatial relationships. A large fraction of the computation time is devoted to identifying the instances of co-location patterns. We propose a novel join-less approach for co-location pattern mining, which materializes spatial neighbor relationships with no loss of co-location instances and reduces the computational cost of identifying the instances. The join-less co-location mining algorithm is efficient since it uses an instance-lookup scheme instead of an expensive spatial or instance join operation for identifying co-location instances. The experimental evaluations show the join-less algorithm performs more efficiently than a current join-based algorithm and is scalable in dense spatial datasets.
Jin Soung Yoo, Shashi Shekhar 0001, Mete Celik
ICDM3