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Claude Rispe

dblp:81/1356 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2007
0000-0002-9489-5719ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics › genomic data management
genome database
0.112007
AphidBase: a database for aphid genomic resources · Bioinform. 2007
Bioinformatics and computational biology
genomics
0.112007
AphidBase: a database for aphid genomic resources · Bioinform. 2007
Bioinformatics and computational biology › genome annotation
functional annotation
0.012007
AphidBase: a database for aphid genomic resources · Bioinform. 2007
Bioinformatics and computational biology › protein function prediction › sequence-based protein function prediction
homology-based function transfer
0.012007
AphidBase: a database for aphid genomic resources · Bioinform. 2007

Methods — techniques the papers use, named apart from their topics

text mining · 0.1co-citation network · 0.1
YearPublicationVenuePosition
2007 AphidBase: a database for aphid genomic resources
abstract
UNLABELLED: AphidBase aims to (i) store recently acquired genomic resources on aphids and (ii) compare them to other insect resources as functional annotation tools. For that, the Drosophila melanogaster genome has been loaded in the database using the GMOD open source software for a comparison with the 17 069 pea aphid unique transcripts (contigs) and the 13 639 gene transcripts of the Anopheles gambiae. Links to FlyBase and A.gambiae Entrez databases allow a rapid characterization of the putative functions of the aphid sequences. Text mining of the D.melanogaster literature was performed to construct a network of co-cited gene or protein names, which should facilitate functional annotation of aphid homolog sequences. AphidBase represents one of the first genomic databases for a hemipteran insect. AVAILABILITY: http://w3.rennes.inra.fr/AphidBase.
Jean-Pierre Gauthier, Fabrice Legeai, Alain Zasadzinski, Claude Rispe, Denis Tagu
Bioinform.4