Ilker Hacihaliloglu

dblp:81/5273 · DBLP profile ↗
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27ranked-venue papers
5as first author
12since 2021 · last 2025
0000-0003-3232-8193ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 22 · 4 first-author · 10 since 2021Applied, interdisciplinary, general and emerging computing · 21 · 5 first-author · 7 since 2021Artificial intelligence and machine learning · 5 · 4 since 2021
YearPublicationVenuePosition
2025 Prompt2Perturb (P2P): Text-Guided Diffusion-Based Adversarial Attack on Breast Ultrasound Images
abstract
Deep neural networks (DNNs) offer significant promise for improving breast cancer diagnosis in medical imaging. However, these models are highly susceptible to adversarial attacks—small, imperceptible changes that can mislead classifiers—raising critical concerns about their reliability and security. Traditional attacks rely on fixed-norm perturbations, misaligning with human perception. In contrast, diffusion-based attacks require pre-trained models, demanding substantial data when these models are unavailable, limiting practical use in data-scarce scenarios. In medical imaging, however, this is often unfeasible due to the limited availability of datasets. Building on recent advancements in learnable prompts, we propose Prompt2Perturb (P2P), a novel language-guided attack method capable of generating meaningful attack examples driven by text instructions. During the prompt learning phase, our approach leverages learnable prompts within the text encoder to create subtle, yet impactful, perturbations that remain imperceptible while guiding the model towards targeted outcomes. In contrast to current prompt learning-based approaches, our P2P stands out by directly updating text embeddings, avoiding the need for retraining diffusion models. Further, we leverage the finding that optimizing only the early diffusion steps boosts efficiency while ensuring that the generated adversarial examples incorporate subtle noise, thus preserving ultrasound image quality without introducing noticeable artifacts. We show that our method outperforms state-of-the-art attack techniques across three breast ultrasound datasets in FID and LPIPS. Moreover, the generated images are both more natural in appearance and more effective compared to existing adversarial attacks. Our Code is publicly available on GitHub.
Yasamin Medghalchi, Moein Heidari, Clayton Allard, Leonid Sigal, Ilker Hacihaliloglu
CVPR5
2025 Implicit Neural Representations with Fourier Kolmogorov-Arnold Networks
abstract
Implicit neural representations (INRs) use neural networks to provide continuous and resolution-independent representations of complex signals with a small number of parameters. However, existing INR models often fail to capture important frequency components specific to each task. To address this issue, in this paper, we propose a Fourier Kolmogorov-Arnold network (FKAN) for INRs. The proposed FKAN utilizes learnable activation functions modeled as Fourier series in the first layer to effectively control and learn the task-specific frequency components. The activation functions with learnable Fourier coefficients improve the ability of the network to capture complex patterns and details, which is beneficial for high-resolution and high-dimensional data. Experimental results show that our proposed FKAN model outperforms four state-of-the-art baseline schemes, and improves the peak signal-to-noise ratio (PSNR) and structural similarity index measure (SSIM) for the image representation task and intersection over union (loU) for the 3D occupancy volume representation task, respectively. The code is available at github.com/Ali-Meh619/FKAN.
Ali Mehrabian, Parsa Mojarad Adi, Moein Heidari, Ilker Hacihaliloglu
ICASSP4
2025 SL2 A-INR: Single-Layer Learnable Activation for Implicit Neural Representation
Reza Rezaeian, Moein Heidari, Reza Azad, Dorit Merhof, Hamid Soltanian-Zadeh, Ilker Hacihaliloglu
ICCV6
2025 CENet: Context Enhancement Network for Medical Image Segmentation
Afshin Bozorgpour, Sina Ghorbani Kolahi, Reza Azad, Ilker Hacihaliloglu, Dorit Merhof
MICCAI (1)4
2025 Flow Matching for Medical Image Synthesis: Bridging the Gap Between Speed and Quality
Milad Yazdani, Yasamin Medghalchi, Pooria Ashrafian, Ilker Hacihaliloglu, Dena Shahriari
MICCAI (16)4
2024 MSA2Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation
Sina Ghorbani Kolahi, Seyed Kamal Chaharsooghi, Toktam Khatibi, Afshin Bozorgpour, Reza Azad, Moein Heidari, Ilker Hacihaliloglu, Dorit Merhof
BMVC7
2023 Ambiguous Medical Image Segmentation Using Diffusion Models
abstract
Collective insights from a group of experts have always proven to outperform an individual's best diagnostic for clinical tasks. For the task of medical image segmentation, existing research on AI-based alternatives focuses more on developing models that can imitate the best individual rather than harnessing the power of expert groups. In this paper, we introduce a single diffusion model-based approach that produces multiple plausible outputs by learning a distribution over group insights. Our proposed model generates a distribution of segmentation masks by leveraging the inherent stochastic sampling process of diffusion using only minimal additional learning. We demonstrate on three different medical image modalities- CT, ultrasound, and MRI that our model is capable of producing several possible variants while capturing the frequencies of their occurrences. Comprehensive results show that our proposed approach outperforms existing state-of-the-art ambiguous segmentation networks in terms of accuracy while preserving naturally occurring variation. We also propose a new metric to evaluate the diversity as well as the accuracy of segmentation predictions that aligns with the interest of clinical practice of collective insights. Implementation code: https://github.com/aimansnigdha/Ambiguous-Medical-Image-Segmentation-using-Diffusion-Models.
Aimon Rahman, Jeya Maria Jose Valanarasu, Ilker Hacihaliloglu, Vishal M. Patel
CVPR3
2023 Diffusion models in medical imaging: A comprehensive survey
Amirhossein Kazerouni, Ehsan Khodapanah Aghdam, Moein Heidari, Reza Azad, Mohsen Fayyaz, Ilker Hacihaliloglu, Dorit Merhof
Medical Image Anal.6
2022 Orientation-Guided Graph Convolutional Network for Bone Surface Segmentation
Aimon Rahman, Wele Gedara Chaminda Bandara, Jeya Maria Jose Valanarasu, Ilker Hacihaliloglu, Vishal M. Patel
MICCAI (5)4
2022 Simultaneous Bone and Shadow Segmentation Network Using Task Correspondence Consistency
Aimon Rahman, Jeya Maria Jose Valanarasu, Ilker Hacihaliloglu, Vishal M. Patel
MICCAI (4)3
2022 KiU-Net: Overcomplete Convolutional Architectures for Biomedical Image and Volumetric Segmentation
abstract
Most methods for medical image segmentation use U-Net or its variants as they have been successful in most of the applications. After a detailed analysis of these "traditional" encoder-decoder based approaches, we observed that they perform poorly in detecting smaller structures and are unable to segment boundary regions precisely. This issue can be attributed to the increase in receptive field size as we go deeper into the encoder. The extra focus on learning high level features causes U-Net based approaches to learn less information about low-level features which are crucial for detecting small structures. To overcome this issue, we propose using an overcomplete convolutional architecture where we project the input image into a higher dimension such that we constrain the receptive field from increasing in the deep layers of the network. We design a new architecture for im- age segmentation- KiU-Net which has two branches: (1) an overcomplete convolutional network Kite-Net which learns to capture fine details and accurate edges of the input, and (2) U-Net which learns high level features. Furthermore, we also propose KiU-Net 3D which is a 3D convolutional architecture for volumetric segmentation. We perform a detailed study of KiU-Net by performing experiments on five different datasets covering various image modalities. We achieve a good performance with an additional benefit of fewer parameters and faster convergence. We also demonstrate that the extensions of KiU-Net based on residual blocks and dense blocks result in further performance improvements. Code: https://github.com/jeya-maria-jose/KiU-Net-pytorch.
Jeya Maria Jose Valanarasu, Vishwanath A. Sindagi, Ilker Hacihaliloglu, Vishal M. Patel
IEEE Trans. Medical Imaging3
2021 Medical Transformer: Gated Axial-Attention for Medical Image Segmentation
Jeya Maria Jose Valanarasu, Poojan Oza, Ilker Hacihaliloglu, Vishal M. Patel
MICCAI (1)3
2020 Improved Automatic Bone Segmentation Using Large-Scale Simulated Ultrasound Data to Segment Real Ultrasound Bone Surface Data
abstract
Automatic segmentation of bone surfaces from ultrasound images is of great interest in the ultrasound-guided computer assisted orthopedic surgery field. These automatic segmentations help the system locate where the bone surface is in the image which can allow for proper surgical manipulation. Most recently, methods based on deep learning have achieved promising results. However, a drawback is that these methods require a large number of training dataset. Therefore, the main objective of this work is the investigation of how large-scale simulated ultrasound data can be used to improve the accuracy of deep learning-based segmentation methods. A transfer learning network and a mixed network approach were used to evaluate how well the large-scale simulated data worked to segment ultrasound bone surfaces. The Sorensen-Dice Coefficient and Average Euclidean Distance values were calculated to determine that by using simulated bone ultrasound data, the success of traditional deep learning methods increases compared to using small-scale real ultrasound data only. Initial results show improvements in segmentation performance can be obtained by combining simulated ultrasound data with in vivo ultrasound scans.
Hridayi Patel, Ilker Hacihaliloglu
BIBE2
2020 GAN-Based Realistic Bone Ultrasound Image and Label Synthesis for Improved Segmentation
Ahmed Z. Alsinan, Charles Rule, Michael Vives, Vishal M. Patel, Ilker Hacihaliloglu
MICCAI (6)5
2020 KiU-Net: Towards Accurate Segmentation of Biomedical Images Using Over-Complete Representations
Jeya Maria Jose Valanarasu, Vishwanath A. Sindagi, Ilker Hacihaliloglu, Vishal M. Patel
MICCAI (4)3
2020 Robust Bone Shadow Segmentation from 2D Ultrasound Through Task Decomposition
Puyang Wang, Michael Vives, Vishal M. Patel, Ilker Hacihaliloglu
MICCAI (6)4
2019 Single Shot Needle Tip Localization in 2D Ultrasound
Cosmas Mwikirize, John L. Nosher, Ilker Hacihaliloglu
MICCAI (5)3
2018 Adversarial Domain Adaptation for Classification of Prostate Histopathology Whole-Slide Images
Jian Ren 0005, Ilker Hacihaliloglu, Eric A. Singer, David J. Foran, Xin Qi 0007
MICCAI (2)2
2018 Simultaneous Segmentation and Classification of Bone Surfaces from Ultrasound Using a Multi-feature Guided CNN
Puyang Wang, Vishal M. Patel, Ilker Hacihaliloglu
MICCAI (4)3
2017 A computationally efficient 3D/2D registration method based on image gradient direction probability density function
Soheil Ghafurian, Ilker Hacihaliloglu, Dimitris N. Metaxas, Virak Tan, Kang Li 0004
Neurocomputing2
2016 Enhancement of Needle Tip and Shaft from 2D Ultrasound Using Signal Transmission Maps
Cosmas Mwikirize, John L. Nosher, Ilker Hacihaliloglu
MICCAI (1)3
2015 Projection-Based Phase Features for Localization of a Needle Tip in 2D Curvilinear Ultrasound
Ilker Hacihaliloglu, Parmida Beigi, Gary C. Ng, Robert Rohling, Tim Salcudean, Purang Abolmaesumi
MICCAI (1)1
2014 Local Phase Tensor Features for 3-D Ultrasound to Statistical Shape+Pose Spine Model Registration
abstract
Most conventional spine interventions are performed under X-ray fluoroscopy guidance. In recent years, there has been a growing interest to develop nonionizing imaging alternatives to guide these procedures. Ultrasound guidance has emerged as a leading alternative. However, a challenging problem is automatic identification of the spinal anatomy in ultrasound data. In this paper, we propose a local phase-based bone feature enhancement technique that can robustly identify the spine surface in ultrasound images. The local phase information is obtained using a gradient energy tensor filter. This information is used to construct local phase tensors in ultrasound images, which highlight the spine surface. We show that our proposed approach results in a more distinct enhancement of the bone surfaces compared to recently proposed techniques based on monogenic scale-space filters and logarithmic Gabor filters. We also demonstrate that registration accuracy of a statistical shape+pose model of the spine to 3-D ultrasound images can be significantly improved, using the proposed method, compared to those obtained using monogenic scale-space filters and logarithmic Gabor filters.
Ilker Hacihaliloglu, Abtin Rasoulian, Robert Rohling, Purang Abolmaesumi
IEEE Trans. Medical Imaging1
2013 Statistical Shape Model to 3D Ultrasound Registration for Spine Interventions Using Enhanced Local Phase Features
Ilker Hacihaliloglu, Abtin Rasoulian, Robert Rohling, Purang Abolmaesumi
MICCAI (2)1
2012 3D Ultrasound-CT Registration in Orthopaedic Trauma Using GMM Registration with Optimized Particle Simulation-Based Data Reduction
Ilker Hacihaliloglu, Anna Brounstein, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
MICCAI (2)1
2011 Towards Real-Time 3D US to CT Bone Image Registration Using Phase and Curvature Feature Based GMM Matching
Anna Brounstein, Ilker Hacihaliloglu, Pierre Guy, Antony J. Hodgson, Rafeef Abugharbieh
MICCAI (1)2
2008 Bone Segmentation and Fracture Detection in Ultrasound Using 3D Local Phase Features
Ilker Hacihaliloglu, Rafeef Abugharbieh, Antony J. Hodgson, Robert Rohling
MICCAI (1)1