Neural encoding and decoding provide perspectives for understanding neural representations of sensory inputs. Recent functional magnetic resonance imaging (fMRI) studies have succeeded in building prediction models for encoding and decoding numerous stimuli by representing a complex stimulus as a combination of simple elements. While arbitrary visual images were reconstructed using a modular model that combined the outputs of decoder modules for multiscale local image bases (elements), the shapes of the image bases were heuristically determined. In this work, we propose a method to establish mappings between the stimulus and the brain by automatically extracting modules from measured data. We develop a model based on Bayesian canonical correlation analysis, in which each module is modeled by a latent variable that relates a set of pixels in a visual image to a set of voxels in an fMRI activity pattern. The estimated mapping from a latent variable to pixels can be regarded as an image basis. We show that the model estimates a modular representation with spatially localized multiscale image bases. Further, using the estimated mappings, we derive encoding and decoding models that produce accurate predictions for brain activity and stimulus images. Our approach thus provides a novel means of revealing neural representations of stimuli by automatically extracting modules, which can be used to generate effective prediction models for encoding and decoding.

Image representation based on image bases provides a framework for understanding neural representation of visual perception. A recent fMRI study has shown that arbitrary contrast-defined visual images can be reconstructed from fMRI activity patterns using a combination of multi-scale local image bases. In the reconstruction model, the mapping from an fMRI activity pattern to the contrasts of the image bases was learned from measured fMRI responses to visual images. But the shapes of the images bases were fixed, and thus may not be optimal for reconstruction. Here, we propose a method to build a reconstruction model in which image bases are automatically extracted from the measured data. We constructed a probabilistic model that relates the fMRI activity space to the visual image space via a set of latent variables. The mapping from the latent variables to the visual image space can be regarded as a set of image bases. We found that spatially localized, multi-scale image bases were estimated near the fovea, and that the model using the estimated image bases was able to accurately reconstruct novel visual images. The proposed method provides a means to discover a novel functional mapping between stimuli and brain activity patterns.

We modeled the inhibitory effects of transcranial magnetic stimulation (TMS) on a neural population. TMS is a noninvasive technique, with high temporal resolution, that can stimulate the brain via a brief magnetic pulse from a coil placed on the scalp. Because of these advantages, TMS is extensively used as a powerful tool in experimental studies of motor, perception, and other functions in humans. However, the mechanisms by which TMS interferes with neural activities, especially in terms of theoretical aspects, are totally unknown. In this study, we focused on the temporal properties of TMS-induced perceptual suppression, and we computationally analyzed the response of a simple network model of a sensory feature detector system to a TMS-like perturbation. The perturbation caused the mean activity to transiently increase and then decrease for a long period, accompanied by a loss in the degree of activity localization. When the afferent input consisted of a dual phase, with a strong transient component and a weak sustained component, there was a critical latency period of the perturbation during which the network activity was completely suppressed and converged to the resting state. The range of the suppressive period increased with decreasing afferent input intensity and reached more than 10 times the time constant of the neuron. These results agree well with typical experimental data for occipital TMS and support the conclusion that dynamical interaction in a neural population plays an important role in TMS-induced perceptual suppression.

This paper proposes neural mechanisms of transcranial magnetic stim- ulation (TMS). TMS can stimulate the brain non-invasively through a brief magnetic pulse delivered by a coil placed on the scalp, interfering with specific cortical functions with a high temporal resolution. Due to these advantages, TMS has been a popular experimental tool in various neuroscience fields. However, the neural mechanisms underlying TMS- induced interference are still unknown; a theoretical basis for TMS has not been developed. This paper provides computational evidence that in- hibitory interactions in a neural population, not an isolated single neuron, play a critical role in yielding the neural interference induced by TMS.