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Jason Montojo

dblp:95/9421 · DBLP profile ↗
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2ranked-venue papers
1as first author
0since 2021 · last 2013
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 2 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 100%

Topics — the 6 heaviest of 7, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › network bioinformatics › biological network analysis › network visualization
biological network visualization		 0.212013
Cytoscape App Store · Bioinform. 2013
Bioinformatics and computational biology › functional genomics
gene function prediction		 0.112010
GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010
Bioinformatics and computational biology › functional genomics › gene function prediction
guilt-by-association		 0.112010
GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010
Bioinformatics and computational biology › network bioinformatics › biological network analysis
network-based prediction		 0.112010
GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010
Bioinformatics and computational biology › network bioinformatics
biological network analysis		 0.012013
Cytoscape App Store · Bioinform. 2013
Bioinformatics and computational biology
functional genomics		 0.012010
GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop · Bioinform. 2010

Methods — techniques the papers use, named apart from their topics

network integration · 0.1guilt-by-association · 0.1
YearPublicationVenuePosition
2013 Cytoscape App Store
abstract
SUMMARY: Cytoscape is an open source software tool for biological network visualization and analysis, which can be extended with independently developed apps. We launched the Cytoscape App Store to highlight the important features that apps add to Cytoscape, enable researchers to find and install apps they need and help developers promote their apps. AVAILABILITY: The App Store is available at http://apps.cytoscape.org. CONTACT: [email protected].
Samad Lotia, Jason Montojo, Gary D. Bader, Alexander R. Pico
 Bioinform.2
2010 GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop
abstract
UNLABELLED: The GeneMANIA Cytoscape plugin brings fast gene function prediction capabilities to the desktop. GeneMANIA identifies the most related genes to a query gene set using a guilt-by-association approach. The plugin uses over 800 networks from six organisms and each related gene is traceable to the source network used to make the prediction. Users may add their own interaction networks and expression profile data to complement or override the default data. AVAILABILITY AND IMPLEMENTATION: The GeneMANIA Cytoscape plugin is implemented in Java and is freely available at http://www.genemania.org/plugin/.
Jason Montojo, Khalid Zuberi, Harold Rodriguez, Farzana Kazi, Sylva L. Donaldson, Quaid Morris, Gary D. Bader
 Bioinform.1