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Y.-F. Liu

dblp:99/203 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2004
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › biological database
disease gene database
0.012004
SCA db: spinocerebellar ataxia candidate gene database · Bioinform. 2004
Bioinformatics and computational biology › genomics › computational genomics
gene prioritization
0.012004
SCA db: spinocerebellar ataxia candidate gene database · Bioinform. 2004

Methods — techniques the papers use, named apart from their topics

user-defined scoring system · 0.0
YearPublicationVenuePosition
2004 SCA db: spinocerebellar ataxia candidate gene database
abstract
UNLABELLED: The positional candidate gene approach accelerates the discovery of genes involved in disease. However, the properties of such disease genes are very diverse and the sample size of known disease genes is too small and does not warrant success by the use of a machine-learning approach. A user-defined scoring system may thus help to determine the priority of candidate genes. Spinocerebellar ataxia (SCA) is a good model to test this approach because most SCA subtypes are caused by an expansion of short tandem repeats (STRs). The SCA db is a candidate gene database for SCA, which collected 3185 genes for 17 types of SCA. Those SCA subtypes that have known disease genes can be used as positive controls to optimize the parameters. The users may browse the candidate genes of a given SCA subtype by using the default parameters. The known disease genes were found to be the top three candidates using the default parameters. Alternatively, the users may score the candidate genes by changing the weight or the scores on the basis of their own working hypothesis. AVAILABILITY: This database is available at http://ymbc.ym.edu.tw/sca/
Y.-F. Liu, Ueng-Cheng Yang
Bioinform.1